Trichomycterus rosablanca: 134302203
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Entry
134302203 CDS
T09921
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
trn
Trichomycterus rosablanca
Pathway
trn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134302203
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Lipoprotein_11
Motif
Other DBs
NCBI-GeneID:
134302203
NCBI-ProteinID:
XP_062843307
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Position
25:complement(6659711..6674450)
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AA seq
617 aa
AA seq
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MCSPMPAPVCLVKNVNGSLHVNDSAIKYLDEISQPVVVVSIVGLYRTGKSYLMNRLAGKQ
TGFMLGSTIESKTKGIWMWCIPHPCIPNHTLVLLDTEGLGSIDKGDSKNDAWIFCLAVLL
SSTLVYNSRGTIDNQALENLHYVTELAEQIKIKSPASAQAEDDDEDFQFVRFFPNFIWTV
RDFVLELKIENKGQVNEDEYLDFALQLKKGTGTRISNYNLPRRCIRNYFPTRKCFVFPLP
ASQDKMTRLESLSENDIWPDFLNVTQHFCDHVFNKSKVKTLKGGQRVAGRMFGHLVQSYV
DTISSGKVPCLENAVVAMARKENQASVEEAVKLYQSGMEQVKNLFPVSFSTISAEHQKLS
TMATAEFLKHSFKDEQVQYFKKLMEEIEKHFAELFVQNMETSEIKCQKLLSDLYLEINER
LQQGEYAKPGGYKLYSIHKEKSIINKYHSQPDKGVRAEDVLETFLNKKRIEADIILQTDT
KLTEHEKKMKEMEEQSALLKQKDEAEEKRMQELEQMVVEGKKHSEERLQQLQEKIKEELL
QQQQELEKAVEKKLHEQNELIQKGFENLAQSVHQGIQQLKKEKEELSISDCFSYVKSALD
IGKDILAMYLLYKSSFK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtccaatgcctgcgcctgtttgtttggtgaaaaatgtgaatggttcactgcat
gtgaatgacagtgccataaaatatctggatgagatcagccagccggtggtagtagtatct
atagtagggctttaccgcactggaaagtcttacctcatgaaccggcttgcaggaaaacaa
acaggatttatgctgggcagcaccattgaatcaaagactaaagggatttggatgtggtgt
atccctcacccctgcatcccaaatcacaccttggtgcttttggacacagaaggactgggg
agcattgacaagggtgactctaaaaatgatgcctggatcttctgtctggctgttcttctc
agcagcactttggtctacaacagtcgtggaactatcgacaaccaagcactggaaaattta
cactatgtcactgagcttgcagaacagattaagatcaaatcacctgcatctgcacaagct
gaagatgatgatgaagatttccagtttgtgcggttctttcctaattttatctggacagta
cgagactttgtactggaactaaaaattgaaaacaagggtcaagtgaatgaggatgagtac
ttagattttgcacttcagctgaagaaaggcactgggacaagaatcagcaactacaatctt
ccaagacggtgtattcgaaactattttccaactcggaagtgttttgtattcccgttacct
gcctcccaggacaaaatgactcgccttgagagcctaagtgaaaatgatatatggcctgat
tttcttaatgtgacacagcatttctgtgaccatgtctttaacaaaagtaaagtcaaaacc
ttgaaaggaggacaaagagtcgctggcaggatgtttggtcacctggttcagtcgtatgtg
gatacaatctctagtggcaaagttccctgcctggagaatgctgtggttgctatggcaaga
aaagagaaccaggcatctgtggaggaagcagttaaactataccagagtgggatggaacag
gtgaagaatttgtttccggtcagcttcagtacaatttctgctgaacaccagaagctcagc
accatggctacagctgagtttctgaagcactcattcaaagatgaacaagtacagtacttc
aaaaaattgatggaggaaatagaaaaacactttgctgagctgtttgttcagaacatggag
acatcagagataaaatgccagaagctgctgtctgatctgtacctggaaatcaatgagcgt
ctgcagcagggggagtatgcaaagcctggaggatataaactatatagcatacacaaagag
aagagcatcatcaacaagtaccacagccagcctgacaagggagtcagagctgaggatgtg
ttggaaacatttcttaataaaaaacgtatagaggcagacataattctccagactgacacc
aaactgacagaacatgagaaaaaaatgaaagagatggaagaacaatcagctttgttaaag
cagaaggatgaagcagaagagaaaagaatgcaggagctagaacaaatggtggtggaggga
aaaaagcacagtgaggaacgactgcagcagctccaggaaaaaattaaggaagagttgctt
cagcagcagcaggagctggagaaagctgtggagaagaaactgcatgagcaaaacgaacta
attcagaaaggctttgaaaatttagcacaaagtgtgcaccaggggattcagcaactcaaa
aaagaaaaggaggaactttctattagtgattgttttagttatgttaagtctgctttagac
attggcaaagatatattagccatgtatttactgtacaaatcctcatttaagtaa
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