Trichomycterus rosablanca: 134302269
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Entry
134302269 CDS
T09921
Symbol
arhgef4
Name
(RefSeq) serine-rich adhesin for platelets isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
trn
Trichomycterus rosablanca
Pathway
trn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134302269 (arhgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134302269 (arhgef4)
Membrane trafficking [BR:
trn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134302269 (arhgef4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
134302269
NCBI-ProteinID:
XP_062843375
LinkDB
All DBs
Position
25:complement(18670708..18692341)
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AA seq
1561 aa
AA seq
DB search
MLIEAALVDSEMFVMPPVDGQTVEPPVDSEVSVKPSNDGEIIGEPLVDSEAPLEPQEEPF
LDALVFVEASTGSEKLVEPSVNCEMVDKIIFSDEHPTGLQDKVIEVQVHNKYTNTEHCDR
LITTDLREPVQCPNTYGVKPQEEQKLIYSGSSGYVVSPLMLPEKESQSATSDISVDTWET
RSGPFDASVVGSSSASSDKSTQGSRTSLHDSGHDSDPNNNLKHCAFESSSTSFSLPEELE
HHDGKRPSSESPSDNSGSLNIMTNVLTNTSSLMELSEPENKGVTVSLGNIEDCRHHEGPS
ETEIFDVIVENLGDMSTMNEVAAEMLCVLKTQPKYHENLEEETCRDSEKDPTSLDFEDTV
EGFLSNSSNLPHNSYIPGSPQALDENASVREVRIIADRPESLTITTWLTNGSENVDSVPS
SASSDLDLISTNSEEAEDLNPSLRENTFSTDGVMKDKDTRSMSAGKSSRFSVFSRMPSLR
RSKREGKTGSKAESDAKAFPEDEEEKKEEVIYNTHNQMSRSTDQLTNCEDPSSDKVFENL
TSSGQSKPLWNTSDAQQPDNQVHFESPYRTDATKRGKSNENLWMKFTMAQRSLSNLFENR
SKENQPQEPNTVHVHTKTRQSWRKRKMSKEAEMLKRALSLPGPDPAIPTQVQTDFEVCLA
QDGLDEQGFPSFSSLSGSVSKTPSPQDSPEFKPAMDSDEPRCGNVHQSSVHSSDFDLAGQ
EPSSWRRSLSTFEGLDTPVKPMTPKPQGHPLWSHRGSFRYPSKLAASSLCSLGQDQSAEG
LSDHQPWRQSFRPRAGQFTFAQSFDSEYLFQDGNPDLQSQTSLASSNSGNESEFSHDGTR
ASTPSTACVRVRRRDRRVSRPRPVSDLCSWTTPLQEILETVGDSVRERNDEEGKTKTRRL
SCSEEVLTETAKVQQSHQVQRMKSNLLRSFSQPSASDSEERQQDRVRLSFTSQQQFSTTS
LKDHVFSRSTPTGLDCLDWPRRVSFSESCLIQASEETCRPSAAFTLVIADGQDKSGLGDD
GGSEDELYNDFHLSANRLGGGEQLAINELISDGSVCAEALWDNVTMDDQELVFKAGDVIE
VVDATNKEWWWGRVQESEGWFPASFVRLRVNQDEPMEDDATQGAPQSAGACVEGSVGPGL
PCKEQMRANVINEIMSTERDYIKHLKDICEGYIKQCRKRVDMFNEEQLRTIFSNIDELYR
FQKKFLKALEKKHNREQPHLSEIGSCFLEHQTEFQIYSEYCNNHPNACVQLSRLMKVKKY
VFFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNAM
KNVARLINERKRRLENIDKIAQWQSSIEDWEGDDVLSRSSELIFSGDLTKISTPQGKGQQ
RMFFLFDHQLVFCKKDLLRRDMLYYKGRLDMDQMEVLDVEDGKDKDLNVTVKNGLKFISP
DGAEVHLLSAKKPELKQRWLRAFSDERQQVRHDRETGFSITEVQKKQAMQNVSKNPPAGK
PKALQHLLTLRAPLLRSKSTKCLHYPQSPSAEYASPLSDVIAPPGVLRRAISWVSSQSRD
L
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgcttatagaggcagcattggtagatagtgagatgtttgtgatgccaccagtggacggt
cagactgtggagccaccagtagatagtgaggtgtctgtaaaaccatcgaacgatggcgaa
ataattggagagccattagtagatagtgaggcacctttggaaccacaggaagaacctttt
ctagatgctttagtgtttgtagaggcatcaacaggtagtgagaagcttgtggaaccatca
gtaaattgtgagatggtagacaagatcatcttttctgatgaacatcctacaggtctacaa
gacaaagtcatagaagtgcaggttcataataaatatacaaatactgaacattgtgaccgt
ctgatcaccaccgatttaagggaacctgttcagtgtcccaatacttatggagtcaaacca
caggaggagcagaagctcatttattctggaagctcagggtacgttgtgtctcctctgatg
cttcctgaaaaagaatcacaaagtgctacctctgatatttctgtagacacttgggaaaca
cgttcaggtccatttgacgcttccgtagttggttcctcgtcggcctcctcggataaaagc
acacaaggttctagaacatcactgcatgattctggccacgattcagatccaaacaataac
ctgaagcattgtgcttttgaatcatctagcacgtcatttagtttaccagaagagctggaa
caccatgatgggaagcgaccgtcctcagagagcccgagcgataattctggttctttgaac
atcatgacaaatgtactaaccaacacttccagcctcatggagctttctgaaccagagaac
aaaggggtcactgttagtctaggtaacatagaggactgtaggcaccatgaaggtccatct
gaaacagagatctttgacgtcattgttgagaatctaggggacatgagcaccatgaacgaa
gtcgctgcagagatgctctgtgttttaaaaactcaacctaaatatcacgagaaccttgag
gaggaaacctgtagagattctgaaaaggatcccacatctttagactttgaggacacggtt
gagggattcctcagtaacagttccaacctgcctcataacagttacattccaggatctcct
caagctctggatgaaaatgcatcagtcagagaggttaggatcattgcagatagaccagaa
tctttgaccattaccacttggctcacaaacgggagtgagaacgtcgacagtgttcccagt
tctgcatcgtcagatttggatttaatcagcacaaacagtgaagaagcagaagatctcaat
cctagcctgagagaaaacacattcagcactgacggggtaatgaaggacaaggacaccagg
agcatgtctgcaggaaaaagctcaaggttctcggtgttctcaaggatgccttcattacgc
aggagcaaacgagagggtaagactggcagcaaggctgaatctgatgccaaagcttttcct
gaggatgaagaggagaagaaggaggaagtgatttacaacacacataatcagatgtcccgg
agtaccgaccagctaacaaactgtgaagatccctcgtctgataaagtatttgagaacctc
acctcatctggacaatccaaacccttgtggaacaccagtgatgcacaacaacctgacaac
caagtacattttgagtccccatatagaacagacgccacaaagagaggcaaaagcaacgag
aacttgtggatgaagttcaccatggctcagaggtcactgtcaaacttgtttgagaaccgg
tccaaagagaaccagccacaggaacccaacaccgttcatgttcacaccaagaccaggcag
tcctggaggaagagaaagatgtccaaagaggctgagatgcttaaacgagctctttcactt
cctggaccagatcctgccatacctactcaagtccagactgactttgaggtctgcttagct
caggatggactggatgagcaaggattcccgagcttctcatcgctgtctggttcagttagc
aaaacaccgtcgccccaagactcgccagagtttaaacctgccatggactcagatgaaccg
agatgtggaaacgtccaccagtcctccgttcactcaagtgattttgatctcgccggtcag
gaaccttcatcctggagaagatctctcagtacttttgaaggtcttgacacaccggtgaag
ccgatgactcccaaacctcaaggtcacccgctttggagccaccgtggcagcttccgttac
ccctcaaagcttgctgcttcctctctctgttcactcggtcaggatcagagtgctgaaggt
ctgtcggaccaccagccatggagacaatccttcagaccaagagcaggacagttcacgttc
gctcagtccttcgattctgagtatctgttccaagacggcaacccggatcttcagtcccag
accagcctggccagcagcaactcggggaacgagtctgagttctcacacgatggcaccaga
gcttccaccccgtccacggcctgcgtccgcgtcagaagaagagaccggcgcgtgtccaga
ccccgacccgtctcagatctctgtagctggaccacgcctctgcaggagatcttagaaacg
gtgggcgactcggtccgggagagaaacgatgaagaaggaaaaaccaaaacgcggaggctg
tcctgctcagaggaggttctcacagagacggccaaggtccagcagagtcaccaggtccag
aggatgaagtcgaaccttctgaggagcttcagtcagcccagcgcttcagattctgaggaa
cgtcagcaagatcgggtgagattgtccttcacgtctcagcagcagttctccaccacgtct
ctgaaagaccacgtcttctctcggagcacgccgaccggtctggactgtctggactggcct
cgccgggtctccttctcagagtcgtgtctgatccaggcgtcggaggaaacatgccgtccg
agcgccgcgttcacgttggtgattgctgatgggcaggataaatcgggactcggggacgac
ggcgggagtgaagacgagctgtacaacgatttccacctctcagctaatcgattaggaggt
ggcgaacagctcgccatcaacgagctgatcagcgatggcagtgtgtgtgccgaggcgctg
tgggataacgtcaccatggacgaccaggagctggtattcaaggccggagacgtcatcgag
gtggtggacgccaccaacaaggagtggtggtggggacgagtgcaggagagcgaggggtgg
ttccccgccagcttcgtccggctgcgtgtgaatcaggacgagccgatggaggacgatgcc
acccagggggcgccgcagagcgcgggtgcttgtgtggagggttcggtgggacccggttta
ccctgtaaagagcagatgagggccaacgtgatcaacgaaatcatgagcaccgagagggat
tacatcaaacacctgaaggacatctgtgagggttacatcaagcagtgtcgtaaacgcgtg
gacatgtttaacgaggagcagctccgaaccatcttcagcaacatcgacgagctctatcgc
ttccagaagaagttcctcaaagctctggagaagaaacacaaccgagagcagccgcacctg
agcgagatcggatcctgcttcctggaacaccaaacagaattccagatttattcggaatat
tgtaacaatcacccgaacgcctgcgtccagctctccagactcatgaaggtgaagaagtac
gtgtttttcttcgaggcctgtcgcctgctgcagaagatgatcgacatctctctggacggt
ttcctcctcacgcccgtccagaagatctgcaagtacccgctccaactcgccgagcttctc
aaatacaccaaccctcagcacagagattataaggatgtggaagcagctctgaatgcgatg
aagaacgtggcgaggctgatcaacgagaggaaacgacggctggagaacatcgacaaaatc
gcacagtggcaaagttccatagaggactgggagggcgacgacgttctcagtaggagctca
gagctgatcttctcaggagatctaaccaagatctctacgccgcagggcaaaggtcaacag
cgcatgttcttcctcttcgatcatcaactggtcttctgcaaaaaggatctgttacggaga
gacatgctgtactataagggacgactggacatggaccagatggaagttctggacgtggaa
gatggaaaagacaaagatctgaacgtcacggtgaagaacgggctgaagttcatctcacca
gacggagccgaggttcatctactgagcgccaaaaagcccgagctgaagcagcgctggctc
cgagccttcagcgatgagcggcagcaggtccgacacgaccgagaaactggattttccatc
actgaggtgcagaagaaacaggccatgcagaacgtctccaaaaatcctccagctggaaaa
cctaaagccctgcagcacctactgactctcagagctccactcctgcgctccaaaagcacc
aagtgcctccattacccacaatcccccagtgctgaatacgcctccccactttcagacgtt
attgcgccccccggggtcctgcgcagagccatttcctgggtctcctctcagagtagagac
ctgtaa
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