Trichomycterus rosablanca: 134302372
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Entry
134302372 CDS
T09921
Name
(RefSeq) syntaxin-1A-like isoform X1
KO
K04560
syntaxin 1A
Organism
trn
Trichomycterus rosablanca
Pathway
trn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
134302372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134302372
Membrane trafficking [BR:
trn04131
]
SNARE
Syntaxin (Qa)
Stx-PM
134302372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
DUF5856
Ferritin
Spectrin_Anc-1_2
Spectrin_Anc-1
Dsc3_C
Lzipper-MIP1
T2SSF
EcoEI_R_C
Orf78
YtxH
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
134302372
NCBI-ProteinID:
XP_062843520
LinkDB
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Position
25:complement(2117056..2148226)
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AA seq
288 aa
AA seq
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MKDRTQELKHGKDTEEEEEEVAVGMEKGFMDEFFEQVEEIRGFIDSLAEKVEEVKRKHSA
ILAAPNPDEKTKAELEELMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQH
STLSRKFVEVMSEYNSTQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDSNITQQAMNEIETRHNEIIKLENSIRELHDMFMDMAMMVESQGDLINNIESNVQDA
QEYTEKAKEDTKAAIKVQKTSKVKLILLGVCVAVCLLILIISLAVGLS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcacacaggaactgaagcatgggaaggacactgaggaggaggaggaggag
gtggcagtgggaatggaaaaaggcttcatggacgagttcttcgagcaggtggaagagatc
cgcggcttcatcgactcgctggctgagaaggttgaggaagtaaagcgaaaacacagtgcc
atcctggccgcccccaacccagacgaaaaaacgaaagctgaactggaagaactgatgacg
gacatcaagaagctggccaacaaagtgcgctccaagctgaagagtatccagcagaccatc
gagcaggaggaaggacagaacaggtcatcagctgacctcaggatacggaagacacaacac
tccacactgtcacgtaagtttgtggaggtcatgtcagagtacaactccacacagtcgagc
tacagggagcgctgcaagggccgaatccagagacagctggagatcactggacggaataca
acaaatgaggagctggagagcatgctggaaagtgacaacccagctatcttcacttcaggg
atcatcatggactccaacataacccagcaggccatgaatgaaatcgaaacccgtcacaac
gagatcatcaagctggagaacagcatccgcgagctgcacgacatgttcatggacatggcc
atgatggtggagagccagggagatcttataaacaacattgaatcaaacgtgcaagacgca
caggagtacacagagaaagcaaaagaagacaccaaagcagctattaaagtccaaaaaaca
agcaaggtgaagttgatcctgttaggtgtttgtgttgcagtctgtctgctcatcctcatc
atctctctcgctgttggactcagctaa
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