Trichomycterus rosablanca: 134302399
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Entry
134302399 CDS
T09921
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
trn
Trichomycterus rosablanca
Pathway
trn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134302399
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
134302399
NCBI-ProteinID:
XP_062843559
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Position
25:6621270..6646014
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AA seq
600 aa
AA seq
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MSQVMSEPVCLISTDAAGQMWVTKEAKDILDEITQPVVVISIVGLYRTGKSYLMNRLAGQ
QTGFALGSTIESKTKGIWMWCIEHPCIDDHTLVLLDTEGLGDIEKGDKKHDTWIFCLAVL
LSSTLVYNSLGVIDNTALKNLHYVTKLTENIRIKAQLGSDDDNSAEFMRVFPSFIWSVRD
FTLELERDGQSITADEYLEGALVLKPGKKEHVLCFAXVTPVTIHYTQVQXHFEXFTFXKI
KXKNKINNXKLXLLKLKELIFIVLNRLPEGSSWNNVAIRSGKVLCLENAVEALTQIQNKQ
ALDQALQIYREQVSMSVCFPLDPLELSDIHKEAEKKAIDAFISISFNDCEQKAQMELMKQ
IQNEYEDLCDQNKKQSAXVCKLILKHVFTSLDGDLNGSFFMHPGGYLEYKHILQYLTRQY
LTRQYRAQTHNKLMSEEVLSEYMKEQEKFERSILLADQRLSGAEKREEERCLQNVALQQQ
RALEKINYLQEQMLRDQERTYKEHLNETLQRMEREMNRSKEDNERVLEAKLKEQQALLEQ
GFRQRADQMNNEAYLTLPFSACTYTQIFQLLGCQVKFICSLIFCDDLKCKLLNEFSLNVA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagtcatgagtgagccagtgtgtctcatcagcactgatgcagctgggcaaatg
tgggttacaaaggaagctaaagatattctggatgagataactcagccagtggttgtgatt
tctatagttgggctctacagaacaggaaagtcttacctaatgaaccgtctagcaggacaa
caaacaggctttgctctgggcagcaccatcgaatcaaaaactaaaggtatctggatgtgg
tgcatagagcacccctgtatagatgatcacacactggtgctgctggacactgagggactg
ggggatattgagaagggtgataaaaagcatgacacctggatcttctgcctggctgttctg
ctcagcagcactctagtctacaacagcctgggggttatagacaacacagcacttaaaaat
cttcactatgtgacaaaactgactgagaatatcagaataaaagcacagctgggcagcgat
gatgacaactcagcagagttcatgcgagtttttccatctttcatctggagtgtacgagac
tttacactagagctagagagagatggccagtcgatcacagctgacgaatacttggagggt
gcattggtgcttaaaccaggtaagaaagaacatgtgttatgttttgcataagttacacca
gtcactatacactacacacaggtacaatgacattttgaatgatttacattctaaaaaata
aaataaaaaaataaaataaataattaaaaattanttttattaaaattaaaagaattaatt
tttattgtcctgaatcgtttgcctgagggtagtagctggaacaatgtagcaattcgtagt
ggtaaggttctctgtctggagaatgcagtggaggctctgactcagatccagaataagcag
gcattagatcaagcactgcagatctaccgggaacaggtctccatgtcagtctgctttcca
ttagacccgctcgagctatcagacatccacaaagaagcagagaaaaaggccattgatgcc
ttcatcagcatttcctttaatgactgtgagcagaaggcacagatggaactcatgaaacag
attcagaatgaatatgaggacttgtgtgatcagaataagaagcagtctgctnntgtgtgt
aaattgatacttaaacatgtgttcacttcactggatggggatctgaatggcagcttcttt
atgcatcctggaggatacctagagtacaaacacatactgcagtaccttacaaggcagtac
cttacaaggcagtacagagcacaaacacacaataagctaatgagtgaggaggtgttgagt
gagtatatgaaggaacaggagaagtttgagaggagtattctgttagctgatcaacgtctt
tctggagcagagaagagggaggaagagaggtgtttgcagaatgtggctctacaacaacag
agagctttggagaaaataaattatctgcaagagcagatgcttcgtgatcaagagaggaca
tacaaggaacacttaaacgagacactgcagcgcatggagagagaaatgaacagatcaaag
gaggataatgaacgagtcctggaggccaaactaaaagaacaacaggctcttctggaacaa
ggttttcggcaacgtgctgatcagatgaataatgaagcttacctgaccctgcctttttct
gcatgcacatatacacaaatatttcagcttctaggatgtcaagtaaagttcatctgcagt
ctgattttctgtgatgatttaaaatgtaagttgctgaatgagtttagtttaaatgtagct
tag
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