Trichomycterus rosablanca: 134302402
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Entry
134302402 CDS
T09921
Symbol
mbd3a
Name
(RefSeq) methyl-CpG-binding domain protein 3a isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134302402 (mbd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134302402 (mbd3a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
134302402 (mbd3a)
Chromatin remodeling factors
NuRD complex
134302402 (mbd3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
NUMOD1
Pardaxin
AnmK
Motif
Other DBs
NCBI-GeneID:
134302402
NCBI-ProteinID:
XP_062843562
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Position
25:complement(15407040..15414859)
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AA seq
274 aa
AA seq
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MEKKRWECSALPNGWKREEVTRKSGLSAGKCDVYYFSPTGKKFRSKPQLARYLGKSMDLS
SFDFRTGKMIMSKLNKNRQRLRYDQSGQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPN
NKVKTDLQKAVEQPRQLFWEKKLSGLCAYDIADELLKSMDFPKGLQGVGPGYTDKTLLSA
IASALHTSSAPITGQMSAAVEKNPGVWLNTTQPLCKAFMVTDEDIRKQEDLVYSVRKRLE
DALMADMLAQVEDLPIDAKSPKDETNSSEEMETV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaggtgggagtgctcggctctcccaaatggttggaaaagggaagaagtg
accagaaagtcgggcttgtccgcggggaaatgcgatgtctattattttagccccacagga
aaaaaattcagaagtaaaccacagctggctcgttatcttggtaaatccatggatctgagc
tcttttgattttcgaactggaaaaatgattatgagcaaattaaacaagaacaggcagcgg
ttacggtatgaccagagcggtcagaacaagggtaagccagatttgaacacttccctacca
gtccggcagacggcatccatctttaaacagcctgttacaaaagtcacgaaccatccaaat
aacaaagtaaagacagatctgcaaaaagctgttgagcagccaagacagcttttttgggaa
aagaagcttagtggactgtgtgcgtatgatatagctgatgagctgttgaagagtatggat
tttcctaaaggccttcaaggggttggaccaggctacacagataaaacactcctgtctgcc
attgccagcgctctgcacaccagcagcgcccccatcacgggtcagatgtctgctgctgtg
gagaaaaaccctggggtttggctcaacactacacagcccctctgcaaagcctttatggtt
acagatgaagacatcagaaagcaggaggacctggtgtacagcgtgagaaagaggctggaa
gacgctcttatggcagacatgctagctcaagtagaagacttgccaattgatgccaagtct
ccaaaggacgagaccaacagcagtgaagagatggagactgtatag
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