Trichomycterus rosablanca: 134302418
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Entry
134302418 CDS
T09921
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
trn04145
Phagocytosis
trn04216
Ferroptosis
trn04621
NOD-like receptor signaling pathway
trn04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134302418 (atg5)
04140 Autophagy - animal
134302418 (atg5)
04136 Autophagy - other
134302418 (atg5)
09143 Cell growth and death
04216 Ferroptosis
134302418 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134302418 (atg5)
04622 RIG-I-like receptor signaling pathway
134302418 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134302418 (atg5)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134302418 (atg5)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
134302418 (atg5)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134302418 (atg5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF8018
Motif
Other DBs
NCBI-GeneID:
134302418
NCBI-ProteinID:
XP_062843581
LinkDB
All DBs
Position
25:complement(3022482..3043507)
Genome browser
AA seq
275 aa
AA seq
DB search
MADDKDILRDVWFGRIPASFTLHPDELTEREAEPFYLLLPRVSYLTLVTDKVKKHFLKVV
KQEDVEEIWFEYEGTPLKWHYPIGVLFDLHASNTALPWSITVHFKTFPDRDLLHCSSSTV
IEAHFMSSIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTDEG
GFRYVPFRIYQTLSDRPFIQKLFRPVSPEGHTLTLGDLMKEMFPAAISLDDEPKKYQVVI
HGIEPLLETPVQWLSEHLSHPDNFLHICVVPVPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacatactccgggacgtgtggttcggccggataccggcgtccttc
acgcttcatccagacgagctcacggaaagagaggcagaaccgttttatttgctccttccg
agggtcagttatctgacactagtgaccgacaaggttaagaagcactttctgaaagtcgtg
aagcaagaggatgtagaagagatatggtttgagtatgaagggacgcctcttaaatggcac
tatccaatcggtgtgttgtttgatctacatgcctcaaatactgctctcccctggagcatc
actgtgcactttaagacttttcctgaccgtgacttgctccactgctcctccagcactgta
attgaggctcattttatgtccagcattaaggaagcagatgcactcaagcacaagagccag
gtcattaatgacatgcagaaaaaagatcacaagcagctgtggatgggtctgcagaacgat
aaattcgaccaattctgggccatgaaccgcaagctgatggaatatccaaccgacgagggc
ggctttcgctacgttcccttcagaatataccagacgctgagcgacaggccgttcatccag
aagctgttcaggcccgtttctccagagggccacacgctcactctcggagacctgatgaaa
gagatgttccctgctgccatcagcctggacgacgagccaaagaaataccaagtggtgatc
cacggcatcgagccgctcctggagacgcccgtgcagtggctgagcgagcacctgagccat
ccggacaacttcctgcacatctgcgtcgtcccggtgccgagcgactga
DBGET
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