Trichomycterus rosablanca: 134302553
Help
Entry
134302553 CDS
T09921
Symbol
cldnf
Name
(RefSeq) claudin f
KO
K06087
claudin
Organism
trn
Trichomycterus rosablanca
Pathway
trn03272
Virion - Hepatitis viruses
trn04382
Cornified envelope formation
trn04514
Cell adhesion molecules
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
134302553 (cldnf)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134302553 (cldnf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134302553 (cldnf)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134302553 (cldnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134302553 (cldnf)
04147 Exosome [BR:
trn04147
]
134302553 (cldnf)
04515 Cell adhesion molecules [BR:
trn04515
]
134302553 (cldnf)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134302553 (cldnf)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
134302553 (cldnf)
Exosomal proteins of colorectal cancer cells
134302553 (cldnf)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
L1 family
134302553 (cldnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
134302553
NCBI-ProteinID:
XP_062843760
LinkDB
All DBs
Position
25:complement(4411115..4420011)
Genome browser
AA seq
410 aa
AA seq
DB search
MASAGLQMIGTALAIIGWMMVIVVCALPMWKVTAFIGHNIVTAQTTWVGIWMNCVVQSTG
QMQCKVYDSMLALSADMQAARAMIIVAILAGICGIMVSVAGGKCTNCIEDARSKSMACIT
AGILFIIAGLLCLIPVSWSAHSIIADFYNPLMMDAQRRELFKMGRIGKEVSGQVLCFLGL
IGICLTCGLPLWRVTTFIGANIVSGQIVWDGLWMNCVIQSTGQMQCKIQSSLMNMTQDLQ
VAQALTVIAILIAFAGVLLTFIGGRCTSCLKNESSMAKTVICGGVLCIVAAIVCLIPVCW
SAAFTVSDYKNVLTPTAQKREIGACVYIGWGTTCVLLLGGILLCTSCPPNDSVYRNNMGM
YPYQGPVMGPAGPYMPAKGYRPSVTYSGTYVPNKQYAAPRAYSAVPGQYL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctgggcttcagatgatcggcacagcgctggccatcatcggctggatgatg
gtcatcgtggtttgcgctttgcccatgtggaaggtcacagcctttattggtcataacatt
gtaacagctcagaccacctgggtgggaatctggatgaactgtgtggtgcaaagcactgga
cagatgcagtgcaaagtctacgactccatgctggctctcagcgcagacatgcaggccgcc
agagccatgatcattgtcgccattttggccggaatctgcgggatcatggtctccgttgct
ggtgggaaatgtaccaattgcatcgaggacgctcgttccaagtcaatggcgtgcatcacg
gccgggatcctgttcataatcgcgggcttgctctgtttgatcccggtgtcatggtcagcc
cacagcatcatcgcagatttttacaacccgttaatgatggacgcacaacggagggagttg
ttcaaaatgggaaggattggcaaggaggtatcgggccaggtactgtgcttcctcggctta
atcggcatctgcctgacctgcggccttcctttgtggcgcgtgaccaccttcatcggggcc
aacatcgtgtcgggtcagatcgtctgggacggcctgtggatgaactgcgtgatacagagt
acgggacagatgcagtgcaagatccagtcgtccctgatgaacatgacgcaggacctgcag
gtcgcccaggccctcactgtcatcgccatcttgatagcgttcgccggcgtgctcttgacg
tttatcgggggccgatgcaccagctgcttgaagaacgagtcgtccatggctaaaacggtt
atctgtggaggcgtgctgtgcatcgtggctgccatcgtgtgcctcattcctgtctgctgg
tcggccgcatttaccgtctccgattacaagaacgtcctcacacccactgctcagaagaga
gaaataggcgcctgtgtgtacatcggctggggaactacatgtgttctacttctgggaggg
atcctcttatgtacttcctgtccaccaaatgacagtgtatatcggaataacatgggcatg
tatccctaccaagggcctgtgatgggaccagcaggaccctacatgcctgcaaaaggatat
cggcctagcgtcacatactctgggacatatgttccaaataaacagtatgctgcccctaga
gcttattcagccgtacctggacaatatttgtaa
DBGET
integrated database retrieval system
