Trichomycterus rosablanca: 134302597
Help
Entry
134302597 CDS
T09921
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
trn
Trichomycterus rosablanca
Pathway
trn03010
Ribosome
trn04120
Ubiquitin mediated proteolysis
trn04137
Mitophagy - animal
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
134302597 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134302597 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134302597 (uba52)
04137 Mitophagy - animal
134302597 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
trn03011
]
134302597 (uba52)
04121 Ubiquitin system [BR:
trn04121
]
134302597 (uba52)
Ribosome [BR:
trn03011
]
Ribosomal proteins
Eukaryotes
Large subunit
134302597 (uba52)
Archaea
134302597 (uba52)
Ubiquitin system [BR:
trn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134302597 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
134302597
NCBI-ProteinID:
XP_062843818
LinkDB
All DBs
Position
25:complement(15057108..15059354)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaagaccttgaccggcaaaaccatcaccctcgaggtggagcccagc
gacaccatcgaaaatgtcaaagctaagattcaagacaaggaaggcattccacctgatcag
cagcgtctgattttcgctggcaagcagttggaagatggccgtactctgtcagattataac
attcagaaagaatccactctgcacttggtgctgcgtctgagaggaggtatcatcgagcct
tcccttaggcagctggctcagaaatacaactgcgagaaaatgatttgccgcaagtgttac
gcacgtcttcacccccgtgctgttaactgccgcaagaagaagtgtggacacaccaacaat
ctgcgccccaagaagaagctgaagtaa
DBGET
integrated database retrieval system
