Trichomycterus rosablanca: 134302617
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Entry
134302617 CDS
T09921
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134302617 (pif1)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134302617 (pif1)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134302617 (pif1)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134302617 (pif1)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
134302617 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
Mg_chelatase
RsgA_GTPase
ABC_tran
AAA_5
AAA_7
AAA_16
PhoH
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
134302617
NCBI-ProteinID:
XP_062843848
LinkDB
All DBs
Position
25:complement(17847726..17858412)
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AA seq
642 aa
AA seq
DB search
MLNSDDGSRLECSVAVERVGGASSGHAVQRRTIRRAAIVLGRDEFRELQLRVQDVRGGPH
ESFPLREFRLHTRFIKDGKCTVSLTPVNAQLLISDCPPDRLKTFLKTLSIKHEASKGTNL
MSERARMRVALPRSFETISPVQIKDVQKANELRSKVNAPLQIRKGLSERSGNRGIEGRQQ
MKRARTDTDSSPVNALHPSKKPVLSMPVAQKLSKEQAAVLNAVLTGKNIFFTGSAGTGKS
FLLKRIVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCLELAQRPGVLQ
HWTSCKHLIIDEISMVEAEFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKE
KPFCFQSRSWRKCIHMNMELTEVRRQTDRTFISLLQAIRVGRVTEEGTAQLLKSANNPIE
RDGIMATRLCTHKDDVELTNENKLKQLPGPVRVFEALDSDPMLVKTIDAQSPVGQVLQLK
VGAQVMLTKNLDVQRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEVMKRERWTFKAAGG
LYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDF
DPRVVQANPDVLLFYKKLRRERLLLQSSMNDFVGKNKENKAW
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactcggacgacggttccagactggagtgcagtgttgcggtggagcgcgtaggt
ggcgcctcctcgggtcatgctgtgcagcgtcggaccatccggcgtgcggccatcgtcctg
ggccgggacgagttccgagagctgcagctgcgtgtgcaggacgtgcgcggcgggcctcat
gaaagtttccccctgcgcgagtttcgcctccacactcgattcatcaaggacggaaagtgc
accgtgagcctcacgccggtcaacgcccagctcctgatctcagactgcccaccggaccga
ctgaaaacgttcctcaagaccctgagcatcaagcacgaggcgtcgaagggcaccaaccta
atgagcgagagggccaggatgagagtggcgctccctcgcagcttcgagaccatcagtcct
gtccagataaaagatgtgcagaaggccaacgagctgaggagcaaagtgaacgccccgctg
cagatccgaaaaggattgagcgagaggtctgggaatagaggtatagaggggcgacagcag
atgaaacgagcccgaacagacacagactctagtccggtgaatgcgcttcacccgtctaaa
aagccggtcctctccatgccagttgcacagaagctcagtaaagagcaggcggccgtttta
aacgcagtcctgactgggaagaacattttctttactggaagtgctggtacaggaaagtcg
tttctgttgaagaggattgtgggatctctgcctcctaagagcacctacgcaactgccagc
accggtgtagcggcgtgtcacatcggcgggaccacactgcacaactttgcaggtatcgga
tcgggttcggctcctctcgagcagtgtttggagttggcgcagagacccggagtcctgcaa
cactggacaagctgcaaacacctcatcatcgacgagatctcgatggtagaggccgagttc
ttcgacaagctggaggccatcgccagatccattagaagatccaccgagccgtttggaggg
attcagctgatcgtgtgtggtgattttcttcagcttcctccagttactaaaggaaaggag
aaacctttttgcttccagtcgcggagctggagaaaatgcattcacatgaacatggagctg
acggaggtgcgcaggcagacggaccgaaccttcatctctctgctgcaggccattcgagtg
ggcagagtcacagaggagggcacggcccagctcctgaaaagcgccaataaccccattgag
agggacggtatcatggcaaccaggctgtgcacacacaaggacgacgttgagctcaccaac
gagaacaaactcaagcagttaccaggaccggtgcgagtgttcgaggctctggacagcgat
ccaatgctggtgaaaactattgacgcacagagtccagtaggacaagtgttgcagctgaaa
gtcggagctcaggttatgctcacaaagaacctggatgtccagagaggcctggtgaacggt
gccagaggggtcgtggtggacttcttgccaggaaatcaaggtctcccgcgggtgcgcttc
ctgtgcggcgcggtggaagtgatgaaacgggagcgctggacctttaaggcggcgggcggg
ctgtacctgagccgccagcagctccccttaaaactagcctgggccatctccatccacaag
agtcagggcatgactctggactgtgtggagatctcgctggcccgcgtgttcgagagcggt
caggcctacgtggctctgtctcgagcgcgcagtctggaggggctccgcgtgatggacttc
gacccgcgggtggtccaggcgaaccctgatgttctgctcttctacaagaagctgagaaga
gagaggcttctcctccagtcctccatgaacgactttgttggaaagaacaaggagaacaaa
gcctggtga
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