Trichomycterus rosablanca: 134302658
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Entry
134302658 CDS
T09921
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134302658 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
134302658
NCBI-ProteinID:
XP_062843896
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Position
25:complement(15726588..15737176)
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AA seq
706 aa
AA seq
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MDQLSFKWLQFLFVSFFYTYVSCSSVEQKIYFNLNNTVPCVRLLNATHQIGCQSSISGNT
GVLHMLENEDDLNWILNKGPHPPYMILIESGEFNRSLMMRLKNSSRVAGVAVIQGSTAPT
QGFSPHTSCPNQNTGVYSEQYGPELSNCSTTVWNPLGNDLSYEDFSFPIFSFKDNNNTQV
IRKCIEDHNMRVNGTAPEYPLCAMQISSHMHAVTDTVTCMRRSDLQQSFSINPEEVCDPL
SDWNVWAPLRPINITAKGHKENESVVIAATRLDGRSFFYEIGPAAEGTVSSIVTLLAAAQ
ALRAVTQVAPPPRNIFFTFFQGEVFDYIGSSRMVYDMQNNKFAIDLDNVHSVLEIGQVGL
RDGPKLWMHSDPVSRRNESVNEEVTALVTNIKSAASALNLSLDEPNATQPLPPASLQRFL
RAQPIPGVLLADHRSSYVNRYYQSLYDTAEYLHVSYPPDLSPEDQLEYETKAAKSLTEVA
TLVARSLYKQAGGEDKFLSNITADTKTMAKLLYGFLVQTNNSWFRSLLPPEAAYGRKSIL
TSAPPLYYVGLSMSNKVKIVTTLVKFILANMTGTATSLNQTQCQSPKDVPGESKDLYSYE
WVSGPASENHTTGEPFCVRSSVFLTKAKSPAFELREYGSKEYSTWTESRWKRTDARIFLI
ASPQLEMLTLGVGIAILLVSLLLTYFISSKAELLFSSTHETPATTY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctttcctttaaatggcttcagtttttattcgtcagtttcttttatacatat
gtgagctgtagctcagtagagcagaagatctactttaacttgaataacacagttccctgt
gtccggctcctcaatgccactcatcaaatagggtgccagtcatctatatcaggaaacact
ggggttctccacatgctagagaatgaggacgacttgaactggatcctcaacaaggggcca
catccaccttacatgatactcatcgagtcaggcgaattcaacagatccttaatgatgagg
ttgaagaactccagtcgggtggcgggagtggcagtgatacaaggcagcacagctcccact
caaggcttctcaccacacacgtcctgccccaaccagaacacaggtgtgtactccgagcag
tacggtcctgagctgtcaaattgcagcacaacagtgtggaacccgcttggcaacgaccta
tcctacgaagacttctcgttccccattttctcatttaaagataataataacacccaagtt
attcgcaagtgtattgaggatcacaacatgcgtgtgaacggcaccgcccccgagtaccca
ctgtgcgccatgcagatctcctctcacatgcacgccgtcaccgacacggtgacctgcatg
cgtcgttcagacctgcagcaaagcttcagcatcaacccagaagaggtgtgcgatcctctc
tcagattggaacgtgtgggcacctctgaggcccattaacatcaccgccaaaggccacaaa
gagaatgagagcgtagtcatcgctgctaccaggctggatgggcgatcgttcttctatgaa
attggtccagcagcagagggaaccgtgtccagcatcgtgaccctgctggctgccgcccag
gctcttcgagcggtcactcaagtggccccgccccctcgcaacatcttctttactttcttt
cagggagaagtttttgattatattggcagctccaggatggtttacgatatgcagaacaat
aaatttgcgatcgatttggacaacgtgcactcagtgctggaaatcggacaggtcgggctt
cgggatggaccgaaactgtggatgcattcagaccctgtgtctcggagaaacgaatcagtt
aatgaggaggtcacggctctagtaaccaacatcaaatctgcagcctccgcactgaatctc
tcactagacgagccaaacgccactcagcccttaccacccgcgtccctacagcgcttcctg
agggctcagccaattccgggtgtgctgcttgccgaccatcgatcctcatacgtgaacagg
tactatcagagtctgtatgatacagcagaatacctgcatgtgagctaccctcctgatctg
agcccagaggaccagctagagtacgagacaaaagctgccaagtctcttaccgaagtggcg
actctggtagctcgctcgctgtacaaacaggctggaggggaagacaagttcctcagcaac
atcaccgctgataccaagacaatggccaagctgctgtacggcttcttggttcagaccaat
aacagctggttccgttccttactgcccccggaggccgcatatggacgcaaatccatttta
acctctgccccaccgctgtactatgtaggcctgagtatgagcaacaaagtgaagattgtg
accaccttggtgaagttcattttggccaatatgactggcactgccaccagccttaaccaa
actcagtgccagagtcctaaagatgttcccggcgagagcaaagatttgtattcttacgag
tgggtatctggtcctgcttctgaaaaccacactacaggggaaccattttgtgtccgatct
agtgttttccttaccaaagccaagtcccctgcttttgagcttcgggagtacggttccaaa
gagtactccacgtggaccgagtcgcgctggaagaggacggatgctcgcatctttctaata
gcgagtccacagttagagatgttgacactgggagtgggtatagctattctgctggtatct
ctgctgctgacctacttcatcagttcaaaggcagagcttctatttagctccactcacgag
accccagcgaccacctactga
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