Trichomycterus rosablanca: 134302671
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Entry
134302671 CDS
T09921
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134302671
Membrane trafficking [BR:
trn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134302671
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_EndoS
LRR_14
LRR_LRWD1
Ig_2
LRRNT
LRR_9
DUF2857
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
134302671
NCBI-ProteinID:
XP_062843915
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All DBs
Position
25:complement(15549355..15551514)
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AA seq
604 aa
AA seq
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MAAEWGLGWLGVSLALLALAPVCQSCPPRCDCVAQLRSVSCQRKRLSGVPEGIPTETQLL
DLSRNRLRWVGPGDFAPYPRLEEVDLSENLISTLEPNAFASLQALRTLHLRGNQLKLVPM
GAFARLTNLTILDLSENKIVILLDYTFQDLHSLKHLEVGDNDLVYISHKAFSGLLGLEDL
TIERCNLTSISGQTLSYLRNLLTLRLRHLSIPALEDQNFRKMTALRGLEIDNWPYLDYIS
PLSFQGLNLTWLSITYTNITTVPSASFRNLAYLTSLNLSYNPISVLEPWAFKDLMRLKEL
HMVSTNLQTVQPYALGGLRQIRVLNLSNNELVTLEESSFHSVNSLETLRVDGNPLSCDCR
LLWILQRRRTLNFDGKMPVCAGPAEVQGNILSSFPDSALFDYFTCQKPKIRNRKLQQMTV
REGQLVSFLCHADGEPVPAIIWISPQRRKISSKSSSRITVLPGGTLEIRYAQVTDSGTYI
CIASNAGGNDTYFATLTVKGQPLDSALFGNRSLYAVDFNDTNLNSTRVFLKFTLDLTTIL
VSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKSEGPTTSSTSGATRKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaatggggcctgggctggctgggtgtgagcctggccctgctggccctcgcc
ccagtgtgccagagctgcccgccacgctgtgactgtgtggctcagctccgctccgtgtcc
tgccagcgcaagcgactttcgggtgttcctgaaggcatcccgactgagacacaactgctg
gacctcagtcggaaccggctgcgttgggtggggcctggagactttgcaccgtaccctagg
ttagaggaggtggacctgagtgagaacctgatatccaccctagagcccaatgcctttgcc
agtctgcaggccttgcgcacgttgcatcttcgaggaaaccagttgaagctggtgcctatg
ggtgcctttgctcgcctgacgaacctcaccatcctggacctgagtgaaaacaagattgtc
attctgctggactatacatttcaggacctgcatagcctcaaacacctagaggttggtgac
aatgacctggtctacatttcccataaggccttctcagggttgctgggactggaggactta
acaatagaaagatgcaatctgacttcaatctctggacaaaccctgtcctacctgcgcaac
ctgctcaccctccgactacgccaccttagcattcctgcccttgaggaccaaaacttccgc
aagatgaccgctctgcgtgggcttgaaattgacaactggccatacctggattacatttcc
cctttaagctttcagggactaaacttgacctggctgtccatcacttataccaacattacc
actgtcccgtcagcttccttccgcaacctagcctacctgacttcccttaatctctcctat
aaccccatatctgtgctagaaccctgggcattcaaggacctcatgaggctaaaagagctg
cacatggtcagcacaaacctgcagacggtgcagccttatgctctgggtggtctgaggcag
atccgagtactcaacctgtctaacaatgaactggttacacttgaggagagctctttccat
tctgtcaacagccttgagactttacgcgttgatggaaaccctctttcttgtgactgccgc
ctactttggattctgcaacgcagacgtactctaaactttgatggaaagatgccagtatgt
gctggtccggctgaggtacagggtaatatactgagcagttttccagattctgcgctgttt
gactacttcacctgccagaagccaaagattcgtaaccggaagcttcagcagatgacagtg
cgtgagggacagttggtatcctttctgtgccatgctgatggtgaaccggtgcctgctatt
atctggatctcaccacaacggcgaaagatcagctcaaaaagcagcagcaggatcacagtt
ctaccaggtggaacactagagattcgttatgcccaagtgacagacagtggcacgtatatc
tgcattgccagcaatgcaggcggcaatgacacctacttcgcaacgctgacagtgaaagga
cagcctctggactcagcgctgttcggcaacaggtcgctgtatgcagtagattttaacgac
accaatctgaacagtacgcgtgtcttccttaaattcacactggacctcaccaccatcctg
gtgtccaccgccatgggttgcatcactttcctgggcgtggtactcttctgtttcctgctg
ttgttcgtgtggagccgcgggaggggtcaacgcaagaacaacttcacagtggagtactcg
ttcaggaaaagcgaggggcccacgaccagttcgacttctggagcgacccgcaagtttaac
atgaaaatgatatga
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