Trichomycterus rosablanca: 134302816
Help
Entry
134302816 CDS
T09921
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134302816 (zeb1a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
134302816 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-met
Motif
Other DBs
NCBI-GeneID:
134302816
NCBI-ProteinID:
XP_062844095
LinkDB
All DBs
Position
25:5913891..5943929
Genome browser
AA seq
1227 aa
AA seq
DB search
MADGPRCQRRKQAMPRRNNVRSFSNVSEAASDSDDEDKLHIVEEDSISDTPDEKPTVLQL
SAAQKLHNGHTQDDGNLGPDALVQEIRVKEECITDEEDEEGQANETPQEKEQSTPEGRGH
DENGTPDDFSKLHTCPYCSRGYKRHTSLKEHIKLRHEKSGDDFSCSLCSYTFSYRTQLDR
HITAHKNGREQQAVSQSGANRKFKCTECSKAFKYKHHLKEHLRIHSGEKPYECSNCKKRF
SHSGSYSSHISNKKCVATPPNSTSNGLSRIPGVKAALTSTQPTRILLREKVDIDNKPLQE
QLPPKQIKEEPVEHDLKSVKSPPAVTTTTSTTGSTTTSTDNGGGVPIQAAAPQGMVQTLV
VPTVGLVQPFSINISDLQNVLKAAMEGSMIRQVVANTNASGTGAKVVNQVQPGGQAMVLQ
SSQPHGQVISAISLPVLNQDGNAKFIIKYNVNPKSNTPNAESGTTEPQTQTQAVDPAAVQ
VNPPPPKAVQVSATQLPKALQINTEQPNITPTQTPSTPIPVNIQTNANKPPSIIKVTKLV
PSQAKPTFLLLRNADGTQSLVVRQLPTVNPTSQAAQAVPRTAEPNPTPDEPTAVAERSSP
AEPNHPAQESATAPENGHRPEDLSSDLLQEIEIKTEPMSPPEMGCEVQTEIVDNLGIKRE
KEEARTVHTSIACGDGFHNYATCLFCDNSPSNLDILNCLHSDEQGCVSSLSSLLKEEDPG
SVQSLSLKSLLPLLKAYSKDSHPTEEQLCRIAESVGLPSDVVGRWFEKMRSKKISLRLAG
NGKNGQPIISNSQPDPRIDTQTSDTPTESQDEASEHSNPSSPLNLTTNDLVIVKTEEPEE
DAQAEPLDLSLPKTCDSNASVATTPAAVSAQEEPLNLTCFKKDMLQGNTIYVAQSATGPI
NIIATPLPTLVAIAESGGVPCLRAAISTKHRTILIPQLSYTYVTPSINKVNTATSVNSIA
TLTPTETQGTAVLNGCQEKADAGAESVSEWEGLNNSNLSPNRKRRRMQSGQYACDLCDKI
FQKSSSLLRHKYEHTGKRPYECGVCKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHS
GSYSQHMNHRYSYCKKEGQDQPEPNSATFTPPLQLDSDERESEDEEGDEQAGERDGEDDA
EFADLDMSEIRVVRIGEEYDDDDDDEEEEEPSTMDDEGTDIQVVKVHTVDEETMETTETE
DSVEAQEETRTLMENGKASDQELNNDR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaaacaggccatgccgaggagaaataacgtg
aggagtttctccaacgtctcagaagcagcgtcagattccgacgatgaagataaactccac
atcgtggaggaggacagtatttcagacactccggacgaaaagccgacagtattacagctc
agcgccgcacagaagctacacaacgggcatacgcaagatgatggcaacctggggccagac
gctttggtgcaggaaataagggtcaaagaggaatgtataactgatgaagaggatgaggaa
ggccaggcaaacgagacaccacaggagaaagaacaaagcacgccagagggaagaggccat
gacgagaacggcacacccgacgacttctccaagctccacacgtgtccgtactgttcccgt
ggttacaagcgtcacacgtcactaaaggagcacatcaaactacggcacgagaagagcggc
gacgacttcagctgctccctctgcagctacaccttcagctaccgaacgcagctcgaccgg
cacataacggctcacaaaaacggacgcgagcagcaggccgtgtcacaatcaggagcaaac
aggaagtttaagtgcaccgagtgttccaaagcctttaaatacaaacatcacctgaaggag
cacctgcgcattcatagcggcgagaaaccgtacgagtgttccaactgtaagaagcgcttc
tcccactccggctcctacagctctcacatcagcaataagaagtgtgtagcaactcctccc
aactccaccagtaacggcttgtcccgcatccccggagtcaaagcggcgctcacctcgact
cagcccacgcgcatcctcctgcgggagaaggtcgacatcgataacaaacccctgcaggag
cagctccctcccaagcagattaaagaagagccggtagagcatgatctcaaaagtgtcaaa
agtccaccggctgttacaacaaccactagcacgacaggcagcaccactactagtaccgat
aacggaggcggggttcccattcaggccgccgccccgcagggcatggtacagacgttggtc
gtacctaccgtgggtctggtccagccgttcagcatcaacataagcgacctacagaacgtc
ctgaaagccgcgatggagggcagcatgatcaggcaggtcgtggccaacacaaatgctagc
ggaacaggcgccaaggtcgtaaaccaagtgcagccggggggacaggcgatggtcttgcag
tcttcacagccgcacgggcaagtcatctctgcgatatctttacccgtcttgaatcaggac
ggaaacgccaaattcatcatcaaatacaacgtcaacccaaaatccaacacgccaaacgcg
gagtccggaacgaccgagcctcagacacagacccaagcggtggatccagcagcagtacag
gtcaacccgccgcctcctaaagcggtacaggttagcgccacacaactcccgaaggcgcta
cagatcaacacggaacaaccaaacatcactccaacccaaacgccatccacgcccatacca
gtaaacatccagacaaatgccaacaaaccaccgtccataatcaaggtgacgaaactggtc
ccatcgcaggcgaagccgacgtttctgctcctgagaaatgcagacgggacgcagagcctc
gtggtgagacagctaccgaccgtgaacccgaccagccaggcggcacaagccgtaccgaga
accgcggagccgaatccgaccccagacgagcccacggcagtggcggaacggagttcaccc
gccgagcccaaccatcccgcgcaggagtccgctaccgctccggagaacgggcatcgaccc
gaagacctgagctccgatcttctgcaggagatcgagatcaaaaccgagcccatgtctcca
cccgagatgggttgcgaggtgcaaactgaaatcgtggataatttaggaataaaaagagag
aaagaggaagcaagaacggttcacaccagcatcgcttgtggcgacggcttccataactac
gcgacgtgtcttttctgcgacaacagccccagcaacctggacatcctcaactgtctccac
agcgatgagcaagggtgtgtcagttctctatcctccctgctgaaggaggaagaccctggg
agtgtgcagagtctgtcgttaaagagtctcctgcctctcctcaaggcatacagcaaagat
tcacaccccaccgaggagcaactgtgtcgaatcgcagagtcggtgggtctgccttcggat
gtggtcggcaggtggtttgaaaagatgcgctccaagaagatctcgctcagactggctggg
aatggcaaaaacgggcaaccgataatctcaaactctcaacctgatcccagaatcgacact
cagacctccgacactccaaccgaatcccaagatgaggcatcagaacacagtaacccttcc
tcacctctcaacctcaccaccaacgatctggtcatcgtcaagaccgaggaaccggaggag
gacgcacaagccgagcctctggacctctcgctcccgaagacgtgcgacagcaatgcctcg
gtcgctaccacgcccgccgccgtctccgcccaagaagagccgctcaatctcacctgcttc
aaaaaagacatgctccaggggaacaccatttacgtggcgcagtctgccacgggtccgatc
aacatcatcgccacacctttgccgacgctggttgccatagcggagtccggaggcgttccc
tgtcttagggccgctatctccaccaaacaccgcacgattctcatccctcagctgtcctac
acctacgtcacaccttccatcaacaaggtgaacaccgccacctctgtgaacagcatcgcc
acactaactcctacagaaacacagggaacggctgtacttaacggctgccaggagaaggct
gatgctggagctgaatctgtatctgagtgggaggggcttaacaacagcaatctgtcacct
aacaggaagcggaggaggatgcagagcggccagtacgcctgcgatctgtgtgataaaatc
ttccagaagagcagttctttgctacgtcacaaatacgaacacacaggcaagcgtccctac
gagtgcggcgtctgcaagaaggcatttaaacacaagcaccacctgatcgagcactcgcgc
ctccactccggggagaaaccctaccagtgcgacaaatgcgggaagcgcttctcgcactcc
ggctcgtactcgcagcacatgaaccatcgctactcttactgcaagaaagagggtcaggac
cagccggagcccaacagcgctacgttcacgcccccgttacagctcgactcggacgagaga
gagagcgaggacgaggaaggggacgagcaagccggggagagagacggcgaggacgacgcg
gagttcgccgacctggatatgagcgagataagagtggtcaggatcggcgaggaatacgac
gacgacgatgatgacgaggaggaggaagaaccgtcaacgatggatgacgagggaacggac
atacaagtcgtcaaagtccacaccgtggatgaggaaacgatggaaaccacggagacggag
gatagcgtcgaagcacaggaggagacgagaacgctcatggaaaacggtaaggctagtgac
caggaattaaacaatgaccgataa
DBGET
integrated database retrieval system
