Trichomycterus rosablanca: 134302819
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Entry
134302819 CDS
T09921
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134302819 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134302819 (prpf38b)
Spliceosome [BR:
trn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
134302819 (prpf38b)
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Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
134302819
NCBI-ProteinID:
XP_062844102
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Position
25:complement(5797444..5808876)
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AA seq
477 aa
AA seq
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MAGNPSPQQQQQQQQQAVLNKSAGGKHGNVLPLWGNEKTMNLNTMILTNVLSSPYFKVQL
YELKTYHEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLF
TLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPADLIEWYEPFLDDEEVCRHGWPKAA
GERGVVVSQHCRFACELDVKAGGGCVMTIGEMLRSFMTKLEWFSTLFPRIPVPVQKAIDV
QMKNRPRKPPQKEGKEEEEVADGDWHRSRSPRRTPSPRRSPNRSRSRSRARERRGASFER
ETERERDRQRKERERDRERDRAERDRPADRDRERERKHSRTPDRNAERRRSRERRNDRKE
RERDLDGDTERERSRRKDREHKERSSGGERELERSKDRKDKRRHRDDREERRHREERKSK
RSSRSRSREKRHKSERSSKKRSRSCSRSRQEASEKSRKRERSPSKERELSDHIRQEK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatccttctcctcagcagcagcagcagcagcagcagcaggcggtgctgaat
aaatccgccggtgggaaacacgggaatgtcttaccgctgtggggtaatgagaaaactatg
aacttaaacacgatgatcctcaccaacgtgctctcctctccctacttcaaagtgcagctg
tacgaactgaagacctaccatgaggtcgtggacgagatctacttcaaggttactcacgca
gaaccatgggaaaaaggcagcaggaaaacagcagggcagactggaatgtgcggaggggta
cgaggtgttggcactggcggtattgtctccacagcattctgtcttctgtataagctgttt
acgctaaaactgacccgtaagcaggtgatgggccttataacacacacggactctccgtac
atcagagcactcggcttcatgtacatacgatacacccagcctcctgcagacctgatcgag
tggtatgagccctttctagatgatgaggaggtatgtcgccacggatggcctaaagcagca
ggtgaacggggagtagtggtatctcagcactgcaggtttgcgtgcgagctggacgtgaag
gctggtggcgggtgcgtcatgacgatcggggaaatgctgcgctccttcatgactaaactc
gagtggttctccacgctgttcccgcgcatcccagtacctgtacagaaggccatcgacgta
cagatgaaaaaccgaccacggaaaccaccacagaaagaggggaaagaagaagaagaggtg
gcggatggagactggcaccgctccagatccccacggagaacgccaagccctcgaagatcc
ccaaaccgctcgcgcagtcgcagccgagcccgagagcgccgcggagccagtttcgaacga
gaaaccgagagagagagggaccgccagcgcaaagagcgagaacgagacagggaaagagac
agggcggagagggacagaccagcagatagggacagagagagggagcgtaaacattccaga
accccggaccgaaacgcggaacggcgcagaagccgggaacgcagaaacgaccggaaagag
cgcgagagagacctggacggagatacagagcgcgagcggagccggcgaaaggaccgagag
cacaaagagcgttcgagcggcggagagagggagctggagcgctcgaaagacaggaaagac
aagcgacggcacagggatgaccgagaggaacggcggcaccgggaggagcgcaaaagcaag
cggtccagccggagcaggagccgagagaagaggcacaaaagcgagcgctcgagcaaaaaa
cgctctcggtcgtgctccaggagccgacaggaggcctcggagaagagcaggaagcgcgaa
cgcagtcccagtaaggagcgggaattatcggaccacatcaggcaggagaaatga
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