Trichomycterus rosablanca: 134302848
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Entry
134302848 CDS
T09921
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134302848 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134302848 (wdr33)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134302848 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
134302848
NCBI-ProteinID:
XP_062844138
LinkDB
All DBs
Position
25:complement(17165410..17187161)
Genome browser
AA seq
1059 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDLRAVQPDAGCFNDLVPPIGMLNNPMNAVTSKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKESTAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMELAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLATIPGMGIPEQLKAAMEQEQSDKETVPEAEMSIPGLDWGMEE
VMQRDLKKPPMKKVPYAKPIPAQFQQAWAENKVPTMAPGEMPKERKDEKIDGKKKTQAEI
EQEMAALQYTNPMLLEQMKMAQMQDLNMPTPGGQPGSMPSFPGQGGSMAAPPQGFPQSMP
SQQMPPNMGPGSMPGHFMPQGPPGPQHHQGPPPQQGMMGPPDMHGPPRHPGPPRNMAPHG
MPPGPRGMQGPSPGPPAGGMMGPPTRGQGPQQGNMMHQDVRGPAPHGNMMGPQGPPQSGM
MGPPSRNHGNMQGMGNMHGMGPPPGGMHGPPNNMQGPPNNMQGPPGNMQGHPQYMQQGKP
MHMGDGNRGQFNQGQNSGPQAMMHGMGQQGPSGKDGPRGPPNHHMGPPSEHQGSDGGGQY
WGEDGGYQENWRRPDRPEYHGEPRGHRGGSGGQWENHDDDYDRYEGFEEEEFDQRPRRTS
YSDDPFRRSSMSGRGSRGGYQDKYGEDQSFDGQEEMGQGWGNGGRGRPRGGPPRGVHDSY
RDGQRGDHSMHDSPSASRERSTSLQGMDMASLPPRKRPWHDGPGTGDMDSPGAGAGPEDR
AAGRPQPREDMGYGPPQSRGGRGGWNRGGRGGPRGGRGR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagatcggctccccgccgcggttcttccacatgccccggttccagcaccag
gctccgcggcagctcttctacaagcggccggacttcgcgcagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgaggaaagccgtgaaccgcaagaccatcgactacaac
ccctccgttatcagatacctcgagaatcgtctgtggcagcgcgatcatcgggacttgcgt
gctgtccagccggatgctggttgcttcaatgatctcgttcctcctatcgggatgctcaat
aaccctatgaatgcggtcacctcaaagtttgtcaggacgtccaccaataaagtgaaatgt
ccagtgtttgtcgtacggtggacccctgaaggcagacgactggtcacgggcgcctcgagt
ggcgagttcactctgtggaacggcctgaccttcaactttgaaactattctgcaggctcac
gacagcccggtgcgagcgatgacgtggtctcacaacgacatgtggatgttgaccgccgac
cacggaggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggcg
cacaaggaggcgattagagaggccagtttctctcctacggataataaatttgccacttgc
tctgacgacggaaccgtgcgcatctgggacttcctgcgctgccacgaggagagaattctg
agaggccacggtgcagacgtcaaatgtgtcgactggcatcccaccaaaggcttggtggtt
tcgggcagcaaagacagccaacagcccatcaagttctgggatccgaagaccggccagagt
ctggcaaccttacacgcccataaaaacaccgtgatggaggtgaagtggaacctgaacggt
aactggctgctgacggcgtctcgagaccacttgtgcaaactgttcgacatccgaaacctg
aaggaggagctgcaggttttcagaggccacaagaaggagtcgacagcggtggcctggcac
cctgttcacgagggcctgttcgccagcgggggctcggacggatcgctgctgttctggcat
gtgggggtggagaaagaggtgggtggcatggagctggcacacgaaggcatgatctggagc
ttagcctggcacccgctcggccacatcttgtgctcggggtccaacgaccacaccagcaaa
ttctggacgcggaatcgaccgggagataagatgcgcgaccggtacaacctgaatctgtta
ccggggatgtcggaagacggcgtggagtacgatgacctggagcccaacagtctggctacc
attcctgggatgggaattccagagcagctgaaagcagccatggagcaggaacaaagcgat
aaagagaccgttccagaggcagagatgagcatcccaggactggactggggaatggaggag
gtgatgcagagggacctgaagaaacctcccatgaagaaggttccctatgcaaaacccatt
cctgctcagttccagcaggcatgggcagagaacaaggtaccaactatggctcctggtgaa
atgcccaaggaaagaaaggacgagaagatagacggcaagaagaagactcaggctgagatc
gagcaggagatggcggctttgcagtacacgaaccccatgctgctggagcaaatgaagatg
gcacagatgcaagatctgaacatgccaacacccggaggccaaccaggctccatgccctcc
ttcccaggccagggtggctccatggcagcaccaccacaaggcttccctcagtccatgcct
tcccagcagatgcctcccaacatgggtcccggcagcatgccaggccacttcatgccccag
ggacctccagggccacagcatcaccagggccctcctcctcagcagggcatgatggggcca
ccggacatgcacggacctccgcgccaccccggaccgcccagaaacatggcgcctcacggc
atgccgccgggacccaggggtatgcaggggccctctccggggcctcctgcaggaggtatg
atgggacccccgactcgtggacaagggccacagcaggggaacatgatgcatcaagacgta
agggggccggcgccccacgggaacatgatgggcccacaggggcccccgcaaagtggcatg
atgggtcctccgtccagaaatcacggcaatatgcaaggcatgggcaacatgcacgggatg
gggccgcccccgggagggatgcacggacccccgaataacatgcagggcccgccgaataat
atgcagggccccccggggaacatgcaggggcatcctcagtacatgcagcagggcaagccg
atgcacatgggcgatggaaacagggggcagttcaaccagggacagaactcggggccccag
gctatgatgcatggcatgggacagcaaggacccagtggcaaagatggtcctcggggaccc
ccgaaccaccacatgggacctccttccgagcaccagggctcagacggagggggtcagtac
tggggtgaggacggaggctaccaggaaaactggagaagaccggacagaccggagtatcac
ggcgagccccggggccacagagggggttctggagggcagtgggaaaaccacgacgacgat
tacgacaggtacgaggggtttgaggaggaggagtttgaccagaggccgagaagaacctcg
tattcggacgaccctttcaggagatccagtatgagcgggcgcgggagccgaggaggctac
caggacaaatacggagaagaccagagcttcgacgggcaggaagagatgggccagggctgg
ggaaacggcggccgtgggaggccgagaggagggccgcctcgcggagttcacgacagctat
cgagacggccagcgaggagaccacagcatgcacgacagtccctcagccagtagagagcgc
tctacatcattacagggaatggacatggcctcactgccgccccgtaaacgaccctggcac
gacggccccggtaccggagacatggactcaccgggagcgggagcgggacctgaggaccga
gcagcaggtcggcctcagcctcgcgaggacatgggatacggtcctcctcagtccagggga
ggtagaggaggttggaaccgcggtgggcgtggcgggccgagaggaggacgagggcggtag
DBGET
integrated database retrieval system
