Trichomycterus rosablanca: 134302856
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Entry
134302856 CDS
T09921
Symbol
yme1l1b
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1b
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134302856 (yme1l1b)
Peptidases and inhibitors [BR:
trn01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
134302856 (yme1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
TIP49
AAA_22
RuvB_N
DUF815
Mg_chelatase
IstB_IS21
AAA_lid_PRS2_C
Zeta_toxin
AAA_33
AAA_17
AAA_28
AAA_18
AAA_14
nSTAND3
AAA_7
FAD-SLDH
Motif
Other DBs
NCBI-GeneID:
134302856
NCBI-ProteinID:
XP_062844165
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All DBs
Position
25:16710511..16720947
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AA seq
718 aa
AA seq
DB search
MFSLSSTVQPQVTVPLSHLINALHTLKGSVSCSSSVKPKHREKSPEQELHTAEPPWNLRD
LGLTDLGVPHLNELVDRLLPCVTENVSPQPARVESNPWRSSYLSTDSFFHNKYGFSVSRT
SGVSPVFCKQSSSPLQTVCSDLNVWPVLIQTRGFKTLKSKTRRVQGAYDRSDTDSFTPSF
MKGLLSRDRAQDPETLDKLLKNKSIPDAHHDAFKTGFAEGFLKAQALTQRTQDSLRRTRL
ILLVLLLVGLYGLYKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQEVV
EFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGV
GASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEG
VIIIGATNFPEALDNALVRPGRFDMQVTVPRPDVKGRTEILKWYLKKIKMDPAVQAEIIA
RGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFAKDKILMGPERRSAEIDEKNKII
TAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSETRAQLLAQMDVTM
GGRVAEEMIFGNENITTGASSDFDSATKIAKMMVTQFGMSEKLGVMTYADLSKQSPETQA
AIEQEVRTLLKDSYERAKTLLKSRSREHKNLAEALLRYETLDAKEIQLVLEGKTLDSR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctgtcgtccaccgttcagccgcaggtcacagttccactcagtcatctcatc
aatgcactgcacactttaaaaggttcagtgagctgcagtagctcagttaaaccgaagcac
agagagaagagtccagaacaagaactgcacactgctgagcctccgtggaacctcagagac
ctgggactgaccgacctgggagtgccgcacctgaatgaactcgtggacagactgttaccc
tgcgtgactgaaaatgtgtcaccacagcctgctagagtagaatcaaatccctggagaagc
tcttacctctccacagactccttttttcacaataaatatggcttctcagtttctagaacg
agcggcgtttcacctgttttttgcaaacaaagctcttcccctctccagaccgtctgttca
gatctgaacgtctggccagtattgattcaaactcgaggctttaaaactttaaagtcaaag
acaagacgcgtacagggtgcgtacgaccgctcggacaccgactcattcactccgtctttt
atgaagggcttgctttcgcgagacagagcacaagatccagagactttggacaagctcctg
aaaaacaaaagcattccagatgcacatcacgacgctttcaagacgggttttgccgaggga
tttctcaaagctcaagctctaacacaaagaacacaagactcgttgaggaggacgaggctc
attttgctggttctgttactggtgggattgtatggactctacaaaacaccgtttctatcg
gtgcggttccgaaccacatcaggcctggactcggcggtggaccccgtccagatgaagaac
gtgaccttcgagcacgtcaaaggcgtggaggaggccaagaacgagttacaggaggtggtg
gagttcctgaagaacccacagaagttcaccgttctgggagggaagcttccgaaagggatt
ttgttagtcggacctccaggtactgggaaaactctgctggcccgggctgtcgcaggtgaa
gctgacgttccgttctactacgcgtccggatcggagtttgatgagatgttcgttggagtc
ggcgccagtcgcattaggaacctgtttcgggaggccaaaggcaacgcgccctgtgtgata
ttcatcgacgagctggacagtgtgggagggaagaggatcgagtctcctatgcacccgtat
tcgaggcagaccatcaaccagctcctggctgagatggacgggttcaaaccgaacgagggc
gtgatcattatcggtgctactaatttccctgaagctttggataacgctctggtccgtcca
ggccgtttcgacatgcaggttactgtccccagacccgacgtgaagggccgcaccgagatc
ctgaagtggtacctcaaaaaaatcaaaatggacccagctgtgcaggctgagatcatagcc
agaggaacagtgggattctcgggagctgagctggagaacctggtgaaccaggctgccctg
aaagccgctgtggacggcaaggagatggtgaccatgaaggagctggagtttgccaaggac
aagattctgatgggcccggagcgacgaagtgcagagatagacgagaagaacaaaatcatc
acagcctaccacgagtccggccatgccatcatcgcttactacaccaaagacgccatgcct
atcaacaaggccaccattatgcccaggggtcccactttgggtcatgtgtccatgctgccg
gaaaacgaccgctggagtgaaacccgagctcagctgctcgctcagatggacgttactatg
ggtggccgagtcgcggaggagatgatcttcggaaatgagaacattactaccggtgcgtca
agcgactttgacagcgctactaaaattgcgaaaatgatggtgacgcagttcggcatgagc
gaaaagctgggggtcatgacttatgcagatctgtccaagcagagcccagagactcaagca
gccatcgaacaggaagtcaggacactcttaaaagattcgtacgaaagagccaaaacgctc
ctgaagtctcgctccagagagcacaagaacctggccgaggctctgctgaggtacgagacg
ctggacgccaaagagatccagctggtactggaggggaaaaccttagacagtagatga
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