Trichomycterus rosablanca: 134303015
Help
Entry
134303015 CDS
T09921
Symbol
acsl4b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00061
Fatty acid biosynthesis
trn00071
Fatty acid degradation
trn01100
Metabolic pathways
trn01212
Fatty acid metabolism
trn03320
PPAR signaling pathway
trn04146
Peroxisome
trn04216
Ferroptosis
trn04920
Adipocytokine signaling pathway
Module
trn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
134303015 (acsl4b)
00071 Fatty acid degradation
134303015 (acsl4b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134303015 (acsl4b)
09143 Cell growth and death
04216 Ferroptosis
134303015 (acsl4b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134303015 (acsl4b)
03320 PPAR signaling pathway
134303015 (acsl4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
trn01004
]
134303015 (acsl4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134303015 (acsl4b)
Enzymes [BR:
trn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
134303015 (acsl4b)
Lipid biosynthesis proteins [BR:
trn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
134303015 (acsl4b)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of breast milk
134303015 (acsl4b)
Exosomal proteins of breast cancer cells
134303015 (acsl4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
134303015
NCBI-ProteinID:
XP_062844328
LinkDB
All DBs
Position
26:252648..271467
Genome browser
AA seq
719 aa
AA seq
DB search
MCVCVYFREKKGESKKGKREREKREKRKEKSSAWFLCQREISEIRCSSVMAAECVRARSV
SGRPEGPYRAVQCVDSLVQQEFEGVDTLDKLFRYAVNKYTPTPCVGSREILSKENETQAD
RKVYQKLVLGEYKWKSYKEVDHQVNQLGSGLAALGQKPRDSIAIFCETREEWMITAQACF
RYNYPLVTLYATLGEDAVAFGLNQCGATHLITSKELLQTKLKAVLVDVSGLKHVIYAGSG
SVNVQDYPQSLSIHSMQEVMELGAKPENLSARCDAPSASDVAVVMYTSGSTGRPKGVVML
HSNLISGMAGQCQRIPELGPQDTYVGYLPLAHVLELTAELSCLSHGCRIGYSSPHTLSDQ
SSKIKKGSKGDCSVLNPTLIAAVPEIMDRIYKSVMGKVGEMSAIQRTLFTLAYKYKLQQV
ERGADTPICNALMFKRISSILGGCVRLMLSGGAPLSSVTHRFINICFCPIAIGYGLTETC
GAGTISEFSDYTTGRVGAPLICSELKLRDWSEGGYTSQDTPHPRGEILIGGPNVAMGYYK
DGGEGESGEFWVDESGQRWFCTGDVGEVHPDGCLQIVDRKKDLVKLQAGEYVSLAKVEAA
LKNCPLIDNVCAYANSNHNFVISFVVPNQKRLTELANKNGIEGEWEELCNHAQLEQEVLK
AIKQAANSNKLQRFEVPLKVRLSSQVWTPETGLVTDAFKLKRKELQRHYEQDINRMYGA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgtgtattttagggagaagaagggggaaagtaaaaaggggaagagagag
agagagaaaagagaaaagagaaaagagaaaagctcggcctggttcctctgtcagagagag
atttctgagatccggtgcagtagtgtgatggcggctgagtgtgtgcgagcacgcagtgtg
tcgggacgtcccgagggcccgtaccgggcggtgcagtgtgtggactctctggtgcagcag
gagtttgagggagtggatacgctggataaactgttccgatatgcagtgaacaaatacaca
ccgacaccctgtgtagggagcagggagatcctctctaaagagaatgagacacaggccgac
aggaaggtctaccagaagctggtgctgggtgagtacaaatggaagtcgtataaggaagta
gatcatcaggtgaaccagctgggcagtggactggccgctttgggtcagaaacctcgtgac
tccatcgccatcttctgtgagaccagagaggagtggatgattactgctcaggcctgcttc
agatacaactaccccttggtgacactttatgccacactcggtgaggatgctgtagcattt
ggtttaaatcagtgtggtgccacacacctcatcaccagcaaagagctgctacagaccaaa
ctaaaggcggtgctggtggatgtttcaggtctgaagcatgtcatctatgcaggcagtgga
agtgtgaatgtacaagattacccacaatccctcagtattcacagtatgcaagaagtcatg
gagctgggagccaaacctgagaacttgagtgcacggtgtgacgctccgtcagcctctgat
gtagcagtagtgatgtacaccagtggatctacaggtcgtcctaaaggagtggtgatgctg
cacagtaacctcatctcagggatggcaggccagtgccagcggatcccagaactcggacct
caggacacgtatgtcgggtatctcccgttggcgcatgtactggaactaacagcagaactg
tcgtgtctgagtcacggctgcaggattggatattcctcaccacacacattatcagaccag
tctagtaagataaagaaaggcagtaagggagactgctccgtactcaatcccaccctgatc
gctgctgttccagagattatggaccggatctataagagtgtaatgggtaaggtgggagag
atgagtgctatacagaggacgctcttcactcttgcctacaagtacaaactgcagcaggtg
gagcgcggagctgacacacccatctgtaacgcgttgatgtttaagcgaatatcctcaata
ctgggtgggtgtgtgagattgatgctgagtggtggagctcctctctcatccgtcacacac
cgattcatcaatatatgtttctgccccatcgccattggttacggcctgacggaaacctgc
ggtgcggggacaatctcagaattctctgattataccacaggacgggtcggggcgcctctc
atctgctctgaactgaaactgcgggactggtctgaaggtgggtacaccagtcaggacacg
ccccacccacggggcgagattttgattggagggccgaacgttgccatgggttattacaag
gacgggggtgagggtgagagtggagaattctgggtagacgagtccgggcagcgctggttc
tgtacaggtgacgtgggagaggtgcatcctgatggctgtctgcagatagtagaccgtaag
aaagatctggtgaagctacaggccggggagtacgtgtctctggctaaagtggaggcagca
ctgaagaactgtccactcatcgacaacgtctgtgcatatgctaacagcaatcacaacttt
gttatcagctttgtggtgcccaatcagaagagactgactgaattagccaataaaaatggg
atcgagggcgagtgggaggagctgtgtaatcatgctcaattggaacaggaagtcctaaaa
gccattaaacaggctgcgaactcaaataaactgcagaggttcgaggttcctctgaaggtg
agattaagctctcaggtttggactccagaaactggactggttacagacgcctttaaactg
aagaggaaagagctgcagagacactatgagcaggacattaaccgcatgtacggagcttaa
DBGET
integrated database retrieval system
