Trichomycterus rosablanca: 134303048
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Entry
134303048 CDS
T09921
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134303048 (sox19a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134303048 (sox19a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134303048
NCBI-ProteinID:
XP_062844374
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All DBs
Position
26:18060649..18064536
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AA seq
288 aa
AA seq
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MYSMLDHELKNQIQTGVMMMPLVNTGGMQVTPKPAAVSTQNQKSSDPLDKVKRPMNAFMV
WSRGQRRKMSQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRALHMKEHPDYKY
KPRRKSKPAPKKENPVSAFPLSTANLQGGNGRMDTYGWGAAGGYGAAQVDPLGYGQQIHR
YDLSGFQYPSAQNYMNSANAYSSVSYSGGAQQQLSPVMSMVKPDQVSPTSSGGGATQPRP
ALQPDLRDMISMYIPTGPGDAVDSHVQRNYSANLQQHYLTSTAPLTHI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaccacgagctgaaaaaccaaattcagacgggcgtcatgatgatg
cccctggtgaacacaggagggatgcaggtgacccccaaacctgcagctgtgagcacccag
aaccagaagagctcggatcctctggataaagtgaagcggcctatgaacgctttcatggtt
tggtcgaggggtcagaggcgcaagatgtcccaggagaacccaaaaatgcacaactcggag
atcagcaagcggctcggggccgagtggaaacttctcaccgacacggagaagcgaccgttc
atcgacgaggccaagcgtctgcgcgccctgcacatgaaggagcatcccgactacaagtac
aaaccccggcgcaagagcaaacccgcgcccaaaaaggagaacccggtcagcgccttcccg
ctcagcaccgcaaacctgcaggggggcaacggcagaatggacacttacggctggggggcg
gccggggggtacggggcagcacaggtcgacccgctcggttacggccaacagattcaccgg
tacgacctgtccgggttccagtacccgagcgcgcagaactacatgaacagcgccaacgcc
tacagctccgtgtcctacagcggcggtgcgcagcagcagctcagccccgtcatgtccatg
gtgaaacccgaccaggtgtctcccacctccagcggcggcggcgccacccagccacgcccc
gccctacagcccgacctgagagacatgatcagcatgtacatcccgacgggccccggggac
gccgtggactcacacgtgcagaggaactacagcgctaacctgcagcagcactacctgacc
agcaccgccccgctcacacacatctga
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