Trichomycterus rosablanca: 134303059
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Entry
134303059 CDS
T09921
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134303059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134303059
Ion channels [BR:
trn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134303059
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ion_trans
Ank_3
Sid-5
Motif
Other DBs
NCBI-GeneID:
134303059
NCBI-ProteinID:
XP_062844383
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Position
26:11066302..11080669
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AA seq
752 aa
AA seq
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MSKPMLLELDDRTLEEKEQDEAAEQDRERAGMGYSDKAKAPMDSNVTMDHGGVLKDIQIN
VNVMNEMQGIQKGPTQQERSDLKKLFNAVSSGDVSKLNNLEKYLNKTNKKLTSNEYMPHG
KTALMTALLHLKNGKNDAVEHLLNIARRMGDLKDLVNAEFRDPNYEGQTALHIAIERRSK
HYVTLLLEHGAKVDARACGKLFQPHSDISFYFGELPLSLAACTNQKDIVDLLMENNANIR
HTDSLGNTVLHALVMVADNTPDNTSFVCSMYDYILSKDIVQNSQQENLEDIENNQGLTPV
KLAAKKGRIQLFDHILQREFQQEESRHLSRKFTEWTYGPVCSSLYDLTSLDTYEKNSVLE
IVVYGTEIPNRLEMLEVEPLNMMLEEKWSRFARPVFLFKAVAYIVYLIIFTAICYSHNKR
GLEFKVEAMLLIILAIGSICFINISGLIYMCRTRGQPMRHSLLIDGYSGYSDLLFIFQAV
LLLICVGLFFADIQEYLAFLVLCLALGWINLLHFLKASKQLGIYSVMIQRMILGDLLHFL
LVYSVFLIGFSTAVVSLVSEESSTVLGGAMKNQTEKPSEDSEKLTFCSTTLELFKLTIGM
GELEFTEKYRYKYVFYMLLILYIVLTYILLLNMLIALMSKSVEEISVESKRVWKLQRAVT
ILDLERCVGCIKQTRSGVKRNLGKEEDEDVRWCLRVDEVNWKIWNHKLNMKHTDFMSDTS
NQMHTTTPNEEGPNDPLESQKDENETDFLLSS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcccatgttgttggagctggatgacaggacgcttgaggagaaggaacaggat
gaagcggcagagcaggatcgtgaacgggctggaatgggctattcagataaagccaaagca
ccaatggactcaaacgtcacaatggaccatggcggggttcttaaagatatccaaattaat
gtaaatgtcatgaatgaaatgcaaggaatacaaaaaggtccaactcaacaagaaagatct
gacctgaagaagcttttcaatgcagtgtccagcggcgatgtctctaaactaaacaatctg
gagaagtacctcaataaaaccaataagaagctcacaagcaacgaatatatgccacatgga
aagacagccctgatgacggctcttctacacctgaaaaatggaaagaacgatgctgtggag
cacttgttaaatatcgccaggagaatgggggatttaaaagacttggtaaatgctgagttt
agggacccaaactatgaaggacagacagctcttcatatagccatagaaaggaggagtaag
cactatgttacactgctactcgagcacggggctaaagtcgatgcaagggcctgtgggaaa
ttatttcagccacacagtgacatatctttctactttggggagctgccattgtctctggcg
gcctgtaccaatcagaaagacatagtggaccttctaatggaaaataacgcaaacataagg
cacacagactctctgggtaacacagttcttcatgctcttgtgatggtggctgataacacc
cctgataacaccagcttcgtctgttcaatgtacgattacattctgagtaaagacattgtc
cagaattcccaacaggagaatctggaggacattgagaacaatcagggactaactcctgtt
aagctggctgctaagaagggtaggattcagctgtttgatcacattctgcaacgtgagttc
cagcaagaagagagcagacatctgtcccgaaagttcacagagtggacttatggacctgtg
tgttcctcactgtatgacctgacctctctggacacctatgaaaaaaactctgtcctggag
atcgttgtttatggaacagagatacctaatcgtttagagatgcttgaggtggagcctctt
aatatgatgctagaagaaaaatggagccgatttgctcgtccagtgtttctgtttaaggct
gttgcttatatcgtctatctcatcatctttacagccatctgttatagccacaacaaaaga
gggcttgaatttaaagtagaagccatgctcctgatcatccttgccattggctcgatctgt
tttattaatatatctggactgatttacatgtgcagaacaagagggcagccaatgcggcat
tcattgctgatagatggttattctgggtattctgacctgctctttatctttcaggctgtc
ctccttctcatctgtgtgggactgttttttgctgatatacaggagtacctagcctttctg
gttctctgtctggctctgggctggatcaatctacttcatttcttaaaagcatccaagcaa
ctgggcatctacagcgtaatgatccaaaggatgattcttggcgaccttctacactttctt
cttgtctactctgtattcctcattggattttcaacagctgtggtgtcactagtgagtgaa
gagagcagcacagttttaggaggagccatgaaaaatcagacagaaaagccatcagaagac
agcgagaaactcaccttctgctccaccaccctggagctgtttaaattaaccataggcatg
ggcgagctggagttcacagagaagtatcggtataaatatgtgttctacatgctgctcata
ctgtacattgtactgacgtacattctgctgctgaacatgctgatcgctcttatgagcaag
agtgtggaggagatttctgtggagagcaaaagagtctggaagctgcagcgtgccgtcact
attttggatcttgagagatgtgttggctgcataaagcaaactcgttctggagtaaagaga
aacctgggaaaggaagaagatgaggatgtccgctggtgtcttagggtggatgaagtcaac
tggaaaatatggaaccacaaactcaacatgaaacatacagatttcatgagtgacacatcg
aatcaaatgcacactactacccctaatgaagaggggccgaatgatcctttagaaagccaa
aaggatgaaaatgagactgacttcctgctatctagctaa
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