Trichomycterus rosablanca: 134303117 Help Entry 134303117         CDS       T09921                                  Symbol sympk Name (RefSeq) symplekin   KO K06100   symplekin Organism trn  Trichomycterus rosablanca Pathway trn03015   mRNA surveillance pathway trn04530   Tight junction Brite KEGG Orthology (KO) [BR:trn00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     134303117 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     134303117 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:trn03021]     134303117 (sympk)    03019 Messenger RNA biogenesis [BR:trn03019]     134303117 (sympk) Transcription machinery [BR:trn03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      134303117 (sympk) Messenger RNA biogenesis [BR:trn03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      134303117 (sympk)     U7-dependent histone pre-mRNA processing factors      134303117 (sympk) SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Rep_Org_C Motif Other DBs NCBI-GeneID:  134303117 NCBI-ProteinID:  XP_062844491 LinkDB All DBs Position 26:4338354..4354946 Genome browser AA seq 1230 aa AA seqDB search MDLGSGDAPSGAGDAAIDMTTNERVVELLNTASLKSTDEKLTILKQVQELIINKDPTLLD NYLDEMLAFQSDKSVEVKKFVIGFIEEACKRDNELLWKLIANLNNWLTDEGVNVVKKAIL TFSQLYKVALQWLVRTRSISETQESCWVMVTQMKDQVLALLDSENDGIRTHAIKFTESLI IALSPRTADSDVPKKQEGDISLDKVPKDHSYIRWDVLSSEGKSALDKLLEFMVHPAISSI NLTTALGSLATLARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKCLKLHLMSLLRH PSSIDFNSQISTLLLDLGMTQAEITRIVPAASVQRKRVRHEPYSEGKRIKIEPALIEDDE DKEESVPVAAPKPSATTGSQSAIDLTAEFLLPLLTPDNVANLVLISMVYLPDVMPASFQA TYTPVESAGTDSQIKHLARLMATQMTSAGLGPGLEQCKARGEEKGGEGDAEAGESTSKDP IIIRKVSAVSLGQAISVVGSSYKTQAAEDTPQTKKLPEPILLTTQSKAPGTSGRKKVFRL ADVVQPLSESHLEKFTGMAVKRILQAEKTIARSGMSHVRVKLLARLMTQFDGTLKEHVLS FILEDIRNRSDLAFSLLYQEYNQYLSQLPSGSLESYEQCLIVMLSGLQERPEQRDGLFTK LVLEAPLITESALEVIRRYCEDESRVYLGMTTLKELIYKRPSRQFQYLHVLLDLSSHEKE KVRSTALTFIKRMYEKEHLRDYIEKFALNYMQLLVHPNPPSLLFGVGEDTEVASPWTEET VRQCLYLYLSLLPLNHRLVHELAAVYTEAIADIKRSVLRVIEQPIRGMGMNSPDLLLLVE NCPKGAETLVTRCLHILTDKVPPSPDLVKRVRDLYHKRVPDVRFLIPVINGLEKKEVIQA LPKLIKLNPIVVKEVFNRLLGTQHSEGSSSMSPLTPGELLVALHNIDSNKCDMKSIIKAT NLCFVEKNVYTSEVLAVVMQHLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIPK QVWKYPKVWEGFVKCCQRTKPQSYTVLLQLPPAQLVSVFERCPEMREPLLQHVRLFTPHQ QAHIPSSIMAILEANSRVPEPEPQPALERMEALEQREIHHQPYVMPIVHAEPPAPTLVAP PELAPQSGFTLEDEEEEPMEEGPAGAESLEIATETTTQNEALEDEATPEATPVPQEQPEE PMEEAEAAEDHPEEAVEHGGAEPETVDSAE NT seq 3693 nt NT seq  +upstreamnt  +downstreamnt atggatttgggctcgggagacgcgccgtctggagcgggggatgcagcaatcgatatgact actaatgaaagggtcgtagaactgctgaacacggcatctcttaagtccactgatgagaaa cttaccatccttaagcaggtccaagagttgattattaataaggatcccacactgctcgac aactacctggatgagatgctggcctttcagtcagacaaatcagtggaagtgaagaaattt gttattggtttcattgaagaggcatgtaaacgggataacgagttgttgtggaagctgatt gcgaacctgaacaattggctgacagacgagggtgtgaacgtcgtcaagaaagccatcctc acattttcgcaactatacaaagtggctctacagtggttggtgcgaaccaggagcatctcg gaaacacaggagtcgtgctgggtcatggtgacccagatgaaagaccaggttctggctctg ctcgactcggagaacgacggcatccgcacacacgccatcaagttcacagagtcgctcatc atcgcgctgtccccccgaacggccgactcggacgtcccaaagaagcaggagggggacatc agtctggacaaagtccccaaggatcactcgtacattcgctgggacgtcctgagctcggag gggaagtcggctctggacaaactactggagttcatggttcatcccgccatctccagcatt aatctgaccacggctctgggttcactggccaccctagcccgacagagacccatgttcatg tccgaagtggtgcaggcctatgagactttacatgccaacctgcccccaactctggccaaa tctcaggtgagcagcgtgcgaaaatgcctcaagctgcacctgatgtctctgctgcgccac cccagcagcatagacttcaacagccagatctctacactgctgctggacctgggcatgacc caggccgagatcacgagaatcgtcccggcggcatccgtgcagcgcaagagagtgcggcac gagccctacagcgagggcaagaggatcaaaattgaacctgcgttgatcgaggacgacgag gataaggaggagtccgtacctgtcgctgcgcccaagccgtcggccaccacgggctcacag tctgctattgatctcaccgctgagttcctgctgcctcttctcacgccggacaacgtggcc aacctggtactcattagcatggtctacctcccagatgtcatgccagcctccttccaggct acttacacacctgtggagtcagctggcacagactcccagatcaaacatctggcccggctg atggccacacagatgacttcggcagggctcggaccaggtttggagcagtgcaaggcccgg ggtgaagaaaagggaggagagggcgacgccgaagccggggaatccacctccaaggatccc atcatcatccgaaaagtgtctgccgtgtccctgggccaggctatatccgtagtggggtcc tcctacaagacccaagctgctgaagatacacctcagaccaaaaagcttccagaacccatt ctgcttacaacacaatccaaagctcctggaaccagtggacggaagaaagtcttcagactg gcagatgtggtccagccattgtccgaatcgcacctggagaagttcacaggcatggccgtg aagcgcatccttcaagcagagaagaccatcgctcgtagtggaatgtcacacgtccgagtc aagctgctggcgagactgatgacccagttcgacggtacgctgaaagaacacgtgctgagc ttcattctggaggatatccggaaccgcagcgacctggctttttccctcctctaccaagag tacaaccagtacctgagccagctgccctcgggatcgctggaaagctacgagcaatgcctg atcgttatgctgtcgggcctacaagagcgacctgagcaaagagacgggctgttcacaaag ctggtgttggaagctcctctgatcactgagtcagccctggaagtgatacggcgctactgt gaggacgagtctcgcgtgtacctgggcatgaccactctaaaagagctcatatacaaacgc ccatccagacagttccagtacctccacgttcttctggatctcagctcccacgagaaagaa aaggttcgctccaccgctctcaccttcatcaagcgcatgtacgagaaggagcatctgcga gactacatcgagaaatttgctctgaactacatgcagctgctggttcacccaaatcctccg tcgctgctgttcggagtcggagaggacacagaggtggcgtctccctggacggaggagacg gtcagacagtgcctatatctctacctctccctcctccctcttaaccaccgcctggtccac gagttagcagccgtctacacagaagccatcgccgacatcaaacgcagcgtgctccgcgtc atcgagcagcccatcaggggcatgggtatgaactctcctgacctgctgctgctggtggaa aactgtcccaagggagcagaaactctggtcactcgctgtctgcacatactgaccgacaaa gttcctccctctccagacctagtgaagcgagtgcgggatctgtatcacaaacgagtccca gacgtccgtttcctcatcccggtcatcaatggtcttgagaagaaagaggtgattcaagca ctgcccaaactcatcaagctgaaccccatagtagtcaaagaagtcttcaaccgtctcctg ggcacacagcacagtgaaggtagttcctctatgtcgcccctgactcctggtgagctcctc gtcgctctccataacatcgactccaacaagtgcgacatgaagtccatcatcaaagccaca aacctgtgcttcgttgagaagaacgtgtacacgtctgaggtgctggccgtggtcatgcag cacctgatggaacagagtcctctacccatgctgctcatgcgaaccgtcatccagtcgctt accatgtaccctcgcctgggtggcttcgtcatgaacatcctgtctcgcctgatccccaaa caggtctggaagtaccccaaggtgtgggaaggttttgtgaagtgctgccagcgcaccaag ccgcagtcctacaccgtgttgctccagctgccgcccgcacagctggtcagtgtgtttgaa cgctgccccgagatgagggagcctcttttgcagcatgtccggttattcacgccacaccag caagcccacattccatcatccatcatggctattctggaggccaacagcagggtgcccgag cctgaaccgcagcctgcacttgaacgcatggaagcactggagcaaagagagatccatcac cagccgtacgtgatgcccatcgtccacgctgaacccccagctccaaccctggtagcaccc cctgaactagcacctcagtcaggattcactctggaggacgaagaagaagaacccatggag gaaggtccggcaggtgcagaatctctcgagatcgccaccgaaaccacaacacaaaacgaa gcactcgaagacgaggcgacacctgaggcgacacccgttcctcaggaacagccagaggaa ccgatggaggaggcggaagctgcggaagatcatccggaggaggcggtggagcacggtggt gcagaacctgaaacagtggacagcgcagagtga

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