Trichomycterus rosablanca: 134303166
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Entry
134303166 CDS
T09921
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134303166 (ythdc1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134303166 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
134303166
NCBI-ProteinID:
XP_062844552
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All DBs
Position
26:complement(14602086..14615207)
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AA seq
716 aa
AA seq
DB search
MTQKSSEYCEDGEVNVLEDILTDAPDQDDELYNLESEHNINDKKGSKRKSDHRDSHSAKR
LRSSGHSTRPPPKRSAPSPGSAGKKSSSVRGRHTSAHFYEDGKSHSGRGRSSRADISKGQ
SRDHQRRMPELKEKLRRTSEDRASRSSKEDEEDVQSEEYASEHQIATSAGSSEGNRSDGE
EEDLMEDDMEGEKGPEEEDEEEEVEEEEGEEEEEEYELEDGDQQEENEQNDYDTRSEASD
SQSESVSFSDGESVHSASGSEASDKERQKKKHARGISPIVFDRSGSSASESYAGSVKKHE
KLPSSVLAVRKDQTSKLKYILRDSRFYLIKSNNHENVSLAKAKGVWSTLPVNERKLNAAF
RSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRR
ELPFTKTAHLSNSWNEHKPVKIGRDGQEIETDCGLQLCMLFPPDESIDLNQVIHKMRHKR
RTHSEPRSRGRPVHREPAPRDVGRRRPEEYDMHNRKRPRIDYPHEFPQRPGFIQDPRNQP
VDRRFSGVRRDVFLNGQHEDSYRCRKALSYNDYMREFHHSIGPPPPWQGMGPYPGMDQPP
HHPYYQHHAPAPQTHPSYSSHHPVPHDARFREKRTARSFSTSLHDYDMRVDDFLRRTQAV
VSGRRSRPRERERQRERDRPRDARRERERERGRERDRDRDRIRDRDREKERGRYRR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaagtcatcagaatattgtgaagatggagaagttaatgttctggaggatatt
ttaactgatgctccagaccaagatgatgaactgtacaaccttgaaagtgaacataacata
aatgataagaaagggtccaaaaggaaaagtgaccatcgagatagccacagtgcgaagcgg
cttaggtcttctggccactctaccaggccaccaccgaagagatcagcaccttcccctgga
agcgctgggaaaaagtcatccagtgtgagaggcagacacacatctgctcacttttatgag
gatggaaagagccattctggcagagggagatcctccagggctgatatatccaaagggcaa
agcagagaccatcagaggagaatgccagagctgaaagagaagctgcgaagaaccagtgaa
gacagggccagccgctcctccaaagaagatgaagaggatgttcagtcagaggagtacgct
tctgagcaccagattgccacttctgcaggctcctctgagggtaatcgctccgacggtgag
gaagaagacttgatggaggacgacatggaaggagaaaaaggtccagaggaagaagatgag
gaagaggaagttgaggaggaagaaggagaggaagaggaggaggagtatgagctagaggat
ggtgaccagcaggaagaaaatgagcagaatgattacgacacacgcagtgaagctagcgac
tcccagtcagaatccgtctctttctcggatggggaatcggtacattcagcatcaggctct
gaggcctcagataaggaaaggcaaaagaagaagcacgctagagggatatcaccaatcgtt
tttgatagaagtggaagctcagcttcagaatcatacgcagggtctgtaaaaaagcatgag
aagctgccatcctcagtcctggctgtcaggaaagatcaaaccagcaagctgaaatacatc
ctgagagactccaggttctacctgatcaagagcaataaccacgagaatgtttctcttgct
aaagcaaagggggtgtggtccaccctacctgtaaacgagaggaaactaaacgctgcattt
cgttcagccagaagcgtcatccttatcttttcagtccgggagagcggcaaatttcaagga
tttgctcggctctcgtctgagtctcatcatggaggttctccaatccactgggtcctgcca
gcaggcatgaacgctaagatgctcggaggtgtctttaaaatcgactggatctgcaggagg
gagttaccttttacaaaaacggcacacctttccaactcctggaacgagcacaagcctgtg
aagattggacgtgatggacaggagatcgagaccgactgcggcctgcagctgtgtatgctc
ttccctccggacgagagcatcgatttgaatcaggttatacacaaaatgcgccacaagagg
aggacgcactcagagcctcgttcccgaggccgccccgtgcacagagagcccgccccccga
gacgtgggaaggcgtcgccctgaagaatatgacatgcacaacaggaagcggcccaggatt
gactatcctcatgagttcccccagagaccaggttttattcaagaccctcgtaatcagcca
gtggacaggcggttttccggagtacgaagagatgtgttccttaacgggcagcatgaagat
tcatacagatgcagaaaagctctgtcttacaacgattacatgcgagaattccatcacagc
attgggcctccaccaccatggcagggaatgggaccctatccaggcatggatcagccaccc
caccacccatattaccagcaccatgctccggcaccccagacccatccttcgtactcaagt
catcaccctgtgccccatgatgcccgctttagggagaagaggactgcacgctccttttcc
accagtctgcatgattacgacatgcgtgtagacgacttcctgaggcgcacacaagcggtg
gtaagcggccgaagaagtcgcccacgagagcgcgagcgccagagggagcgcgaccgaccg
cgggatgcccgccgagagcgcgagagggagcgcggacgcgagagagaccgtgaccgagat
cgcatcagagaccgtgaccgagagaaagagagaggtcgctatcgtagataa
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