Trichomycterus rosablanca: 134303182
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Entry
134303182 CDS
T09921
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134303182 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134303182 (zgc:163098)
Spliceosome [BR:
trn03041
]
Complex A
U2 snRNP components
U2 related factors
134303182 (zgc:163098)
Complex B
134303182 (zgc:163098)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
cwf21
RRM_1
CID
CTK3
RRM_7
SPT2_N
Motif
Other DBs
NCBI-GeneID:
134303182
NCBI-ProteinID:
XP_062844581
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All DBs
Position
26:complement(1975921..1987536)
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AA seq
897 aa
AA seq
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MADKKSKSAAVKRVLTKKEQEELKKKEEEKAAEVFEEFLASFDGSEKSGGKMFVRGGIVN
ATKDEEVAELKKSKLYKPASRFAPVTQNPPVSPVQHVESRRTSYPQSAKKKTDEKKKSNL
ELFKEELKQIQEEREERHRRKNDPGGVVSDLDLSAPRPRSIFDDDPTLPTTTNLYIGCIS
PKMTEEMLCKEFGKYGLLASVKIMWPRTGEEKTRETNRGFVAYMVRKDAERALAALDGKT
VMGFEMKLGWGKAVRIPPHPLYTPVGVLKSMAPPPPSGLPFNAQPRDRFRNDFSKTRSRT
QADFLKTLYDAIVTVVIPSERNLLCLIHRMIEFVVREGPMFEAIIMNREKENPEYRFLFD
NKSQEHVYYRWKLFSILQGETPNMWKQSMFRMFRNGSLWRPPVLNPYLQGDEEPEDEPPP
VQEEEPKKGQLKPEHKEQLEVVLRGLTPRRVEVGDAMLFCLEKAEAAEEVVSCIAESLSM
IQTPLQKKIARLYLVSDILYNSSAKVANASYYRKFLELKLPQIFSDMGEAYRNIQARLQA
EQFKQRIMACFRAWEDWAVYPESFLIQLQNVFLGIIKPGEEMPERTEVTRRPPPASPDMD
GAPLDGVPLDGNELDGMPLDDLDGSPMTWEPSSIDGVPVDDIDGVPLGQAIDDIDGMPLD
EGVDKTLPAVALSKWERVDDAEPSAKANSEDDMSASEAKENEADSDEDSSSDDDDAASPS
RFEGAEFKSSLRNFEMSESKRTRLRELEVKVMKFQDELESGRRPGKSGMSLQQQVQHYRN
KLLQKEFDKDNEEKRDKSGSKKDRSKKEERRERVEEKSKGKERERDRERERDRSKKSEDQ
EKSRGRSREEDDRSERTRSRSPRKSKRSRSPSPQRRSRRSTSRSPHRSHKKSKKSKH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaagagcaagtcagccgcagtgaagagggtgctgacgaagaaggagcag
gaggagctcaagaaaaaggaggaagaaaaagctgctgaagtgtttgaggaattcttggca
tcatttgatggcagtgaaaagagtggagggaaaatgtttgtacgaggagggattgtgaat
gccactaaagatgaagaggtagccgagctgaagaagagtaaactgtataagccagcctct
agattcgctcctgtaactcagaatcctcctgtatcaccagtgcagcatgtagagtctaga
agaacctcttacccacagtcggccaaaaagaagaccgatgagaagaaaaagagcaacctg
gaactgtttaaagaggagctgaaacagattcaagaggagagagaggagcgccacagaagg
aagaacgatccaggaggggtggtgtcagatctggacctttcagcgccacgcccacgctca
atatttgatgatgatccaaccttgccaaccacgactaacctttacatcggctgcatcagt
cccaagatgacggaggagatgctgtgcaaggagttcgggaagtacggcctgttagccagt
gtcaagatcatgtggcctcggaccggggaggaaaagaccagagagacaaaccgcggattc
gtggcctacatggttcggaaggacgccgagagggctctggccgccttggacgggaaaacg
gtgatgggttttgagatgaagctgggctggggaaaggcggtgcgaatcccccctcatccc
ctctacactcccgtgggtgtattaaaatccatggcgccccctcctccctctggtctgccc
ttcaacgcccaaccccgcgatcgcttccgcaacgatttcagcaaaacccgcagtcgaaca
caagcggacttcctcaagactctgtacgacgccatagtgacagtggttatcccatcagaa
aggaacctgctgtgcctcatccacagaatgattgagtttgtggtgagagaaggacccatg
ttcgaggccatcatcatgaatcgagagaaggaaaaccctgaatacagatttctgtttgat
aataagagtcaggagcatgtgtactacaggtggaagcttttttctatactacagggcgag
actccgaacatgtggaagcagtccatgttccgaatgtttcgtaacggctcgttgtggcgt
ccgcctgtcctcaacccttacctccagggtgacgaggagcccgaggacgagcctccgcct
gtgcaggaggaggagccgaagaaagggcagctgaaacccgagcacaaggagcagctggag
gtggtactgaggggcttaacccctcgcagggtggaggtcggcgacgccatgctgttttgt
ttagaaaaagccgaggctgccgaggaggtcgtgtcctgcatcgccgagtctctctccatg
atacagacgccactacaaaaaaagatcgcgcggctctatctggtttcggacatcctgtac
aactcgtcggccaaagtcgcgaacgcgtcatactaccggaaattcttggagttgaagctg
ccccagatcttcagcgacatgggcgaggcgtatcggaacatccaggccaggctgcaggcc
gagcagttcaaacaaaggatcatggcctgtttccgagcgtgggaggactgggccgtctac
cccgaatcctttctgatccagctgcagaacgtcttcctggggatcatcaaaccgggagag
gaaatgcccgagaggacagaggtgacgcggcgccctccgcccgcttctccggatatggac
ggagcaccgttagacggagttcctctagacgggaacgagctggacgggatgcccctggac
gacctggacggatcacccatgacctgggagccgtcgtccatcgacggggtccctgtggac
gacatagacggcgtccctctcggccaggcaatcgacgacatcgacggcatgccactggac
gaaggcgtggataagactttaccagctgtggccttgtctaaatgggagcgagtggacgac
gcagagccatcagctaaagccaactccgaggacgacatgagcgccagcgaagcgaaagaa
aacgaggccgactcggacgaggacagcagcagcgacgacgacgacgcggccagtcccagc
aggttcgagggcgccgagttcaagagcagcctgcgcaacttcgagatgtccgagagcaaa
aggactcgactccgcgagctggaggtgaaggtgatgaagttccaggatgagctggaatcg
gggaggaggccggggaaatccggcatgagcctccaacagcaggttcaacactacagaaac
aagctgctacagaaggagttcgataaagacaatgaagaaaagagagacaagtcagggagt
aagaaggaccggtcgaaaaaagaggagcgcagagagcgagtagaggagaagagcaaagga
aaggagcgagagcgggacagagagagggagcgagaccggagtaagaagagcgaggaccaa
gagaagagcagagggaggagccgggaggaggacgaccggagtgagaggacgaggtctcgc
tcgccgcggaagtcgaagcgctcacgttctccgtctccacagcgcagatcccgccgctcc
acgtcccgatcgccccaccgctcacacaaaaaatccaagaagagcaaacactga
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