Trichomycterus rosablanca: 134303203
Help
Entry
134303203 CDS
T09921
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134303203 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134303203 (chrne)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134303203 (chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
134303203
NCBI-ProteinID:
XP_062844610
LinkDB
All DBs
Position
26:complement(2301573..2309452)
Genome browser
AA seq
517 aa
AA seq
DB search
MAARCIWTCLVIAVLVISEVQVSANEETQLIAALFKNYNKNIRPTKHVDDKVSVQIKLIL
TNLISLNEKEETLTTNVWIEIQWSDYRLAWNTSEYYDIDVIRVPCTTVWLPDIVLENNND
GKFDVAYYANVLVYSDGSVYWLPPAIYRSVCAVEVTYFPFDWQNCTLVFRSQTYSANEID
MILAVDGETNKPIEWVDIDPEAFTENGEWAIKHRPARKLTNPRYSPDDIEYQEIYFNVII
QRKPLFYIINIILPCSLISSLVVLAHFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKVPE
TSLSVPLIGKYLIFVMSVTTLIVTNCIFVLNYSLRSPSTHNMSRTIKHIFLEVIPRFLGM
TPLVDESEEDGGVDGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSFVDT
IDVSSTASLYKSLAQAAPEIKECVDACNFIAESTRQQNDIGSEMESWVLIGKMIDKVCFW
AAILLFTIGTVAIFLMGHFNQVPEYPFANENKKYAPE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccggtgcatttggacgtgtttggtcattgctgtgctcgtcatttcagaagtc
caagtcagtgcaaacgaagagactcaactgatagcagctttattcaagaactacaacaag
aacatccgaccgacgaagcatgtggacgacaaggtctcggttcagatcaaactcatcctt
accaacctgatctctctgaacgagaaagaagagactctgactaccaacgtgtggattgag
attcaatggagcgattatcggctggcgtggaacacctcggaatactacgacatcgatgta
atccgtgtgccctgcactaccgtctggctcccagacatcgtcctggagaacaacaacgac
ggcaaatttgatgttgcgtattatgctaacgtgctggtctacagcgatggctccgtgtac
tggttgccgccagccatctaccgcagcgtctgcgctgtagaggtcacctacttccccttc
gactggcaaaactgcacactggtgttcagatctcagacgtacagcgccaacgagatcgac
atgattctggctgttgatggagagaccaacaagcccattgagtgggtggatattgaccca
gaggccttcactgagaacggcgagtgggctattaagcaccgaccagctcgcaagctcacc
aacccacgctactctccagatgatatcgagtaccaggagatctacttcaacgtcatcatc
cagagaaaacctctcttctacatcatcaacatcatcctgccctgctccctcatctcgtca
ctggttgtactggcacacttcctaccagctcaagccggaggtcagaagctgacggtgtcc
atctcagtcctcctggcccagactgtcttcctctttctgatagctcagaaggttccagaa
acgtctctgtccgttcctcttatcggaaagtacctgatcttcgtcatgtcagtcaccacg
ctcatcgtcaccaactgcatcttcgtcctgaactactctctccgcagcccgagcacacac
aacatgtctcgaaccatcaaacatatttttctggaggtgatccctcgtttccttggcatg
accccgctcgtagacgagtccgaggaggacggcggggtggacggcgtgagagagaggaga
cggagctctttcgggctgatgcagagggctgaggagtatgtactgaagcagccgaggagt
gagatgatgttcgataagcaaagagagaggcatggactcacacgatcgttcgtggacacc
atagatgtgagcagcactgccagcctgtacaagagcctcgcccaagcagcaccagagatt
aaagagtgtgtagatgcctgcaacttcatcgcagagtccacacgccagcaaaacgacatt
ggatctgagatggagagctgggtcctgataggcaagatgatcgataaggtttgcttctgg
gcagccatcttgctcttcactatcggaacggtggccatcttcctcatgggccatttcaac
caggtgcccgaatacccgtttgccaacgagaacaaaaaatatgcccccgagtaa
DBGET
integrated database retrieval system
