Trichomycterus rosablanca: 134303229
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Entry
134303229 CDS
T09921
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134303229 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134303229 (taf6)
03036 Chromosome and associated proteins [BR:
trn03036
]
134303229 (taf6)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134303229 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
134303229 (taf6)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
134303229 (taf6)
STAGA complex
134303229 (taf6)
TFTC complex
134303229 (taf6)
SAGA complex
134303229 (taf6)
SLIK complex
134303229 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
134303229
NCBI-ProteinID:
XP_062844637
LinkDB
All DBs
Position
26:complement(18269819..18287298)
Genome browser
AA seq
619 aa
AA seq
DB search
MAEERRQKAVSSVQFSTESMKVMAESVGVSQLQEESCIALSEEISYRIKEITQDALKFMH
HGKRRKLTTSDIDHALKLKNVEPLYGFQTQDFIPFRFASGGGRELHFYEEKEVDLSDIIN
TPLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVSKEQQKTESSEPMKAIKPGKEEDGSIQ
NKSQGSSSEVKGKEKLRLKPRNTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMMKALMDNPTLYLEKYLHELIPAVMT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFSKAWLDEKTQW
TTRYGCIAGLSELGPDVIKTLIIPRLPIEGARIKAVIEGPVVSNIDKIGADHVQSLLLKH
CASVICKMRSPPDTVDQYRTDYGYLGPPLCSHVIKARAQNAMQSQSVNRTTLTITQSRPS
LSVSQSSVSNVTGSRTPSIIKVPSSLTLMSTRPTTPTQPSPPTTKYIVMGTSAGPSSTQQ
MITLSSSQSSSSVTSTVQSVSAPLQPLVKVEPGVTGSVMGSRPVQKYIVVSLPQSSSLDK
SNLSPISTETKIEPSDTPS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcgcaggcagaaggcggtgagttcggttcagttctccactgagtcgatg
aaggtgatggccgagagtgtcggagtctcacagttacaggaggagagctgcatcgccctg
agtgaggagatcagctacaggatcaaagagatcacacaggatgctctgaagtttatgcat
catggaaaacgacgcaaactgaccaccagtgacatcgatcacgctctcaaactaaagaac
gtagagcctctgtatgggtttcagactcaggactttataccgtttcgttttgcgagtggt
ggcggccgagagcttcacttctatgaggaaaaggaagtggatctgagtgacatcatcaac
acgcccctcccgcgtgtacccctggacgtctcactcaaagctcactggttgagtattgat
ggagttcagccggcgattccagagaatccaccacccgtatctaaggagcagcagaagact
gaatcctcagaaccaatgaaggccatcaaaccaggaaaggaagaagatggttccatccaa
aataaatcacagggatccagctcagaggttaaagggaaggagaagttgaggttgaaaccc
cgcaatactcatgaactgtcggtggagcagcagctttattataaagaaatcactgaagcc
tgtgtgggatcttgtgaggctaaacgagccgaggcgctacagagtatagctacagatcca
ggcctgtaccagatgcttccacgcttcagcaccttcatctctgagggagtgcgggtgaac
gtggtacagaataacctggcgttattgatttatctgatgaggatgatgaaggctctgatg
gataatcccacgctctacctggagaaatatctccatgagttgataccggcggtgatgacg
tgtatcgtgagtaagcagttgtgtttgaggcctgatgttgataatcactgggctctgaga
gattttgctgctcgtctcatggctcagagctgcaaaaccttcagcaccaccaccaacaac
atccagtcccgcatcaccaaaaccttcagcaaggcgtggctggatgagaagacccagtgg
acgacgcggtacgggtgtatcgctggtctttctgaactcggccctgatgtgataaagacg
ctaataatcccccgtttgcccattgagggtgcccgcattaaggcagtgattgagggtcca
gtggtttctaacattgataagatcggtgctgatcacgtccagagtttattactgaaacac
tgtgcgagtgtgatctgtaagatgcgttctcctcctgacacggtggatcagtacagaact
gattatggatatttggggccgccgctgtgttcacacgtcatcaaagctcgagctcagaac
gccatgcagagccagagtgtgaaccggaccacactcaccatcacacagtctcgtccgtct
ctatcagtctctcagagcagtgtgagtaatgtgactggttccagaactcccagtataatt
aaggtacccagctctctcaccctcatgtctacccgaccaaccacgcccacacagccatca
cccccgacaaccaagtatattgtcatgggaaccagcgctggcccctcctccacacagcag
atgatcactctaagctcctcccagtccagttcttcggtcaccagcaccgtacagagtgtc
tctgcccccctgcagccgctggttaaagtggagccgggagtaactgggtcagtgatgggg
tcacgacctgtacagaaatacatcgtagtgtcgctgcctcaatcctcatcactggataaa
agcaacttgtcccccatcagcaccgaaaccaagatcgaaccttccgacacacccagctga
DBGET
integrated database retrieval system
