Trichomycterus rosablanca: 134303376
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Entry
134303376 CDS
T09921
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134303376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134303376
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134303376
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134303376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
134303376
NCBI-ProteinID:
XP_062844837
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All DBs
Position
26:11618760..11729870
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AA seq
799 aa
AA seq
DB search
MRLAARRLAGLWPWLFTAALQVALGHAGLELAVTRALIKVTLLKQEPTGKPITLEGVFAG
SSSGYAEGKLMQSHPLSLCNTSEDERQESFFISIVKLESPESKVPQCQPLLNKARLAFQR
GAQAVIFDISDDAGAAHELWDSGSLPRPVVLVKAADAEELMGLVNKNEEAMVQIDIMIDA
PKWPHYEVGILLTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSHG
CSGGSQHQHSGQGSTSSSSSAPICAICLEEFLDGQDLRIISCAHEFHKQCVDPWLLQHRT
CPLCMHNIMGAELIARQPQQVRGHPLPEHSQAFLHPHPQHYPASHSYPQHSIPFSLRPHY
PRTLSGPYPPMGHYAGSGPLHTRLTSGSCGYHLAPDAHRSHPRHSCRNVGHHYTTPRRSC
HHCLNTRPRHLNYHQTQRHAGSQGRQDDASCSGASYGTERSGYYPDGPGSDSSSGPCHGS
SSDSVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHSASSEGQAESARPRSLDSGVNQT
SVGLGFEEPQQQQAVFSHVHYHRHRHHYYEEGEPSQGPGRGSDEEQGTSGVTMDNSHMSK
DSNLCQVSHATCHCPKTDPLERTGPSGGVEVRDMSKLSPTSSLPGTSVLIPSPTCCHPGH
HPKTTSCGLETSAGHIPTVHFHQRVDLQDDCSIHIHYGQSATGYCCPPPLGAASTLLPVP
VILDSGGLTEWPCCGGTCRGWQKQIQQAHSEPQLIGSGTPLDTPLCRGHHSAGHELPTEI
CLYCQSARNNQGSEEESGV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgccgcacggcgcctggccgggctctggccgtggctgttcacggccgccctg
caggtggcgctgggccacgcgggcctggagctggcggtgacccgcgccctcatcaaggtc
acgctgctcaagcaggagcccacgggcaagcccatcaccctggagggtgtgttcgccgga
agcagcagcggatacgccgagggaaaactcatgcagtctcacccactgtctctgtgtaac
actagcgaggatgagcggcaggaaagcttcttcatcagtatcgttaagctggagagtcct
gagagcaaagtgccccagtgtcagcctcttttaaacaaggctcggctcgcttttcagagg
ggggctcaggctgtcattttcgacattagtgatgatgccggtgcagctcatgagctctgg
gattccggctccctgccaaggccggtggtgctggttaaggcagcagatgcagaggaactg
atgggcctggtcaataagaacgaggaggccatggtccagatcgacatcatgattgatgca
ccaaaatggcctcactatgaagttggcattcttttgactgtcgtcttggttgtgctggcc
atcattatgatctttgctttccgctctcgctgcagatccaacagaacctgggattcagtg
caccagcaaacaatgcgggctatcagcaggctggagacacgtacatacagctctcacggc
tgctcgggaggatcacaacaccaacacagtggccaggggtccaccagtagctccagctca
gctcctatctgtgccatctgcctcgaggagttcctagatggacaggacctgaggatcatc
tcatgtgcacatgagtttcataagcagtgcgtggacccgtggttgctccaacacaggacc
tgccctctctgcatgcacaatattatgggtgcagagctgattgcccggcagcctcagcag
gttcgtggtcacccacttccagagcacagtcaggctttccttcaccctcacccacagcat
tacccagcatcccactcttacccccagcattctattccattctccctccggccccattac
ccccgcaccctctctggaccttaccccccaatgggacactatgctgggtctggtcccctt
cacacccggttaacaagcggcagctgcggttatcatctggccccagatgctcaccgctct
catcctcgtcacagctgccgcaacgtcggacaccactacacgacaccgaggcgttcgtgc
caccactgcctcaacacccgaccacggcacctgaactaccaccagacccagcggcacgca
ggctctcaggggcgccaggatgacgccagctgctcaggtgccagctacggcaccgagcgc
agcgggtactaccccgatgggccaggcagcgactcgagctcgggtccctgccacggctca
tctagtgactctgtgcttaactgcacggacgtcagcctgcagggcgtctacggtagctgc
tccactttccgcagctcgctcagcagcgagtacgacccgttcgtctaccacagtgccagt
tcagagggtcaggccgagagcgccaggccccgatcgctggattcaggagtaaatcagaca
agtgtaggactcgggtttgaagaaccacaacagcaacaggctgtatttagccacgtgcac
taccacagacacagacaccactattacgaggagggcgagcctagtcaaggacctgggcga
ggctctgatgaagagcaagggacttcgggagtcacaatggacaattcacacatgagtaag
gactcaaatttgtgccaggtgtctcatgcgacatgccactgtcccaaaacggacccttta
gaaagaactggaccttccggtggggtggaagtacgggacatgtccaaactttctccaacg
tcttccctgcccgggacttcagtgttgatcccttcaccaacttgctgtcaccctgggcac
caccccaaaaccaccagctgtggcctagaaacttcggctggacatataccaactgtgcac
ttccatcaaagggtggacctgcaggatgactgcagcatccacatccactatggacaaagc
gccacaggctactgctgcccccctcctttgggcgcggcatccacgttgctcccggtgcct
gttatcttggactcaggtgggctgacagagtggccgtgctgtggagggacatgcaggggg
tggcaaaagcagatacagcaggctcactctgagccacagctaatagggtcaggcactcct
ttggacacgccgctgtgcaggggacaccacagtgccgggcacgagctgcccacggaaatc
tgtctctactgccaaagtgcacgcaataatcagggatcagaggaagagtccggcgtttaa
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