Trichomycterus rosablanca: 134303391
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Entry
134303391 CDS
T09921
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134303391 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134303391 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134303391 (ncor1)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134303391 (ncor1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
134303391 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
134303391
NCBI-ProteinID:
XP_062844858
LinkDB
All DBs
Position
26:complement(10898894..10991162)
Genome browser
AA seq
2367 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSPARHQQEFTVPEYRNSHLQDQQQRRRPSLL
SEFHPGTERPQEFRHAYEQQFHTITDHEVVEAKRPRVEGSIEGHLPRGQHAGILLPLQHP
VPDSLRPAGEIKKETQYSVKLEASSLGGGVHSLGEEQDTSTSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPAPVEHKHRSIVQIIYDENRKKAEEAHK
IFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQRYD
QLMEAWEKKVERLENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRHVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEIFKEKFVQHPKNFALIASYLERKCVADCIFYYYLTKKSQNYKTLVR
RNYGSRRRRNQQITRPSQEEKNEEKNEEDRSERADKKEDDEKKDEEEKDEKEDSKDIGKD
KEKCEGEDEEGKEQSTPRGRKTANSQGRRKGRITTRSMANEASSNAAEDLPAAAPPSPPP
EPDLPEPVPPLKSEPALKPAREVAKPAPLSPIDTQARAGAVEIGETSRWTEEEMEVAKKG
LVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKKRHNLDNLLPQPKQLSTRLRERDASQSDS
VATASADDDDDDENLDDSEGAENSSDTESAPSPTQSDTSKSAEYVPQASDQELAAPKAPS
TDAKAHELFGDLQVKVEKSPEGAAVSESAFQDEAQLQPKSEPQDAEAEGRVKTEPETRDK
EKQSEHQHSDNDSSATCSADEDVDTEPDRQRVFSMEKPSILGGAASVVVAMAKQAPLSVQ
QLHQRAATIPPMVSGPFGPAGVPVGAPLSGYTMFQHQIKAAHESVHMEDNQRQEAGEAER
RSRYTTHSPTVLDREGKSFAYMSYDMKLMEQEALGGAGRPGSPYRLSPREPSKASPQPEP
NAVRYSVPPVLQPAPNQMVPNLPDGMRMTSFRHRPANIPSPPPLIPTSKPSDKPTFIQGG
SILQGTPGTYLPSHTHAIYGPEGAKSAGGSISLGLPRQQDPAKPVSYIKQEECSPRGQSS
PAEGLLSRAQYEGVVRGGPMPAIQDLGRGPTGKAPEGLQFRGGSITHGTPALSQSSITAD
LLKGSISKLTAEDLSSPEKSRAETLSKPHIIYESRSGHLISYETKNPREGTRSPRTGHEL
KRTYEMMDGTRGHPTREAYEGLISRALPRDGPHPESKERSILTGSIMQGTPRNAAEAFDE
AKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKEMGRSIHEIPRKEVPDSRKTPVLEGS
VTQGIPLKYESSGAGQSTIKHNVKSLLTSPGKLEDPKIPERVRHTSVVSSTSVLRSTHQE
ASKSQLSPGMYEDANARRTPNYPSGSISRGSPLLRAQEGIGGITAGKPVSHERKSTLTPT
QRDSIPAKSPISGGEPLASHSPFDPHQVYRAHLPPHLDPSLFHHRVLDPAAYMFPRQPSP
TGYPNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQIAIQYPPGARGII
DLAQMPPTILLPHPGGTGSPSLDRITYIPGAQPPFPPRVFSISPGHLAASVERERERERE
REREREHREREKEREKERERERERDRERERERMAANEYMRAAQEQPGRPGSRGFLRSPSP
SMRSQDRPSIFQGTSKSVITPLIRQMPPTSTAGQTNSRYSTAADALAALVDAAASAPQMD
VATAKEGKHDSVNSRDDVTVSRPMQLPPSKAPLPLYSDGGAGPGGSKDKTQPTKSRIEEE
LRQHGKTTITAASFIDVIITRQIASEKDSRERGSQSSDSSSSLPPSRYEPQTSGAIEVIS
PASSPAQREEKNERSFPPEKSSQPPTGSVRGFDLGRYRQPMEPGPPAPQPPTTQIHRVMT
LADHISHIITQDFAKNQDFPPSSSSLPSSSSSSSTSSTFQSSGAGGGGARGKVPNRYSPE
NPGHPTHHQKPGNRVSPENASEKPRTSRPGKSPERTGGVGGRARESYEPISPPQNYSGLE
KQESNMLQGRRDQELSEQRTDSRSPCSGSYLPAFFTKLESTSPMVMSKKQEIFRKSDVGN
AQPGTEIFNLPAVTSSSNMNPRNHSFSDPAHNLGLEDIIRKALMGNVDERPEDQAQQAQS
VGSSAQSNTEGRAEASPSHNTGRYSAKQKLQSKASNRKTKSPNQGQAYAGGERPSSVSSV
HSDGDYHRQPPSWNWEDRPSSTGPMQFPYNPLTMRMLSSTPPSIACPSPSMQSQQQLAES
AAAPARVWEREPPLLLDEYDSLSDSDD
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcgggcttccctcccagccaggggagcttcagcagcgagcagagccgctat
ccaccacattcagtgcagtacaccttcagccctgcacgccatcaacaggagttcacagta
ccggagtaccgcaatagtcacttgcaggaccagcagcaacggcgtcgaccctcgttgctg
tcagaatttcatcctggaactgagaggcctcaggagttcagacatgcatacgaacagcag
tttcacacgatcacggaccacgaggtcgtggaggccaagcggccccgggtcgaaggctcc
atcgaaggccacctgcctcgagggcaacacgccggcatcctcctaccactacagcaccct
gtaccggacagtctccgacctgctggagagatcaagaaggaaacccagtacagtgtgaag
ctggaggcctcatccctggggggaggtgttcacagcctgggggaggaacaggacacgtcc
acctccaaactctccaaagaggagctcatccagagcatggaccgtgtggaccgcgagatc
gccaaggttgagcaacagatattcaaactgaagaagaagcagcaacaactggaggaggaa
gcagctaagcctgtggagcctgaaaagccagtgtctccggcccctgtggagcacaaacat
cgcagcattgtccagataatttacgatgaaaatcggaaaaaagctgaagaagcccacaag
atatttgaaggactcggccctaaagtagaactgccgctgtacaaccagccgtcagatact
aaagtgtaccacgacaacattaagacaaatcaagtgatgaggaagaagcttattctgttc
ttcaagaggaggaaccacgcacgcaaacagagggagcagaagatctgccagcgctacgat
cagctgatggaggcgtgggagaagaaggtggagcggctggaaaacaacccgcggcgcaag
gccaaggagagccgcacgcgcgagtactacgagcgccagttccccgagatccgcaaacag
cgcgagcaacaggaacgcttccaaagggtgggccagagaggaacggggctgtcggccacc
atagcgagaagcgagcatgagatctccgagatcatagacggcctgtcggaacaggagaac
aacgagaagcagatgaggcagctatcggtcatcccccccatgatgtacgattcggagcag
cggcacgtgaagttcatcaacatgaacggactcatggacgaccccatgaaggtctacaaa
tcacggcagttcatgaacgtctggacggagcacgaaaaagagattttcaaagaaaaattt
gtgcagcacccaaagaactttgccctgatagcctcttatcttgaacgaaagtgtgtggct
gattgtatcttttattactacttgaccaagaagagccagaactacaagacactcgtcaga
cgcaattacggcagcaggagacgaaggaaccagcagataacgcggccctcgcaggaagaa
aagaacgaagagaagaacgaggaggacagatcggagagggcggataagaaagaggacgac
gagaagaaggacgaggaggagaaagatgaaaaagaggactcgaaggacattggcaaagac
aaagagaagtgtgaaggcgaggacgaagaggggaaggagcagagcacgccacgcggccgc
aagactgccaacagccagggccgccgcaagggccgaatcaccacacgctccatggccaac
gaagcctcttctaatgctgccgaggatctaccagcagcagcccctccgtcgccacccccc
gagcctgatttacctgagcctgtgccccctcttaaatcggagccagcgctgaagcctgca
cgagaggttgccaagcctgcccctttgagccctatagacacacaagcacgagcaggagct
gtcgagatcggagagacatctcgctggacagaggaggagatggaggttgccaaaaaaggg
ctggtagagcacggcagaaactggtcggccattgctaagatggtgggcaccaagagcgaa
gcccagtgcaagaatttttacttcaattacaagaagcgacacaacctggacaacctgctg
cctcagcccaagcagttaagcacacgactgcgggagcgagacgcttcacagagcgacagc
gtggccacggcttctgctgacgacgacgacgacgacgagaacctggacgacagcgaaggt
gcagaaaacagctcggacaccgaaagcgccccctctccgactcagtccgacacctccaag
tcggcggagtacgtccctcaagcctctgatcaggaactcgccgcccccaaagcacccagc
acagatgccaaagcccatgagctcttcggtgacctgcaggtcaaggtggagaagagtcca
gaaggtgctgccgtaagcgaatccgccttccaggacgaagcccagctgcagcccaagagc
gaacctcaggacgccgaggcagaggggcgagtgaagaccgagccggagaccagggacaag
gagaagcagagcgagcaccaacattcggacaacgactccagcgctacctgcagcgccgac
gaggatgtcgacaccgaaccagacaggcagagggtgttttctatggagaaaccttccatc
ctcggaggtgccgcatcagttgtggtagccatggccaagcaagctccgctcagcgtacag
cagctccaccagcgtgctgccaccatccctcctatggtctcgggtccgttcgggccagcc
ggcgttccggtcggagctcctctgagtggctacactatgttccagcaccagatcaaagct
gcacatgagtcggtgcacatggaggataaccagaggcaggaggccggggaggcggagcgg
aggtcacgctataccacccacagccccaccgtcctcgaccgagaaggtaaatcgtttgct
tacatgtcatacgatatgaagctgatggaacaggaggcgcttggaggtgcaggaagacct
ggctcaccttacagactctctcctagagagcccagcaaagcctcaccccaacctgagccg
aacgccgtccgctacagcgtcccaccagtgctgcagccggcccccaaccaaatggtcccc
aatcttcccgatggaatgcgcatgacttcgttccgccacaggccggccaacattccgtcc
ccccctcctctcatcccgacgtccaaaccctcagacaagcccaccttcatccagggagga
tccattttacagggaacgccaggcacgtatctgccctcacacacgcatgccatatacggg
ccggagggagccaagagcgccggaggatccatctctctcggcctgccaaggcaacaggac
cctgccaaacctgtgtcctatataaagcaggaggagtgttcaccgcgtggacagagctct
cctgctgaggggcttctctccagggctcagtacgagggagtggtcagaggtggaccgatg
cctgccatccaggacctgggccgagggcctacaggaaaagcaccagaaggacttcagttc
agaggaggctccatcacacacggcaccccagctctgtctcagtccagcataacagccgat
ctgctgaagggcagcatttccaaactgaccgccgaggacctgagcagcccggagaagagc
cgagccgagacgctgtccaaacctcacatcatatacgagagcaggagtggccatcttatc
tcctatgaaaccaagaaccccagggaaggtactagaagccccaggacaggccacgaactc
aagcgcacatacgaaatgatggacggtaccagagggcatcccacacgggaggcatatgaa
ggcttgataagcagagcgctgccaagagatggtccccaccctgaatccaaggagcggtcc
atactcaccggatccatcatgcaaggaacacctcgaaacgccgcagaggctttcgacgag
gccaagtacggcaagcagatcaagagggagagtccacccatccgctccttcgaggggggc
atcaccaaaggcaagccctacgagggagtgaacaccattaaagaaatgggacgctccatt
cacgagatcccccgcaaggaggtgccggacagccgcaagactcctgtcctggaaggatcc
gttactcagggcatccctctgaaatacgagagcagcggcgccggccaatcgaccatcaag
cacaacgtcaagtccctcctcaccagcccgggcaagctggaggaccctaagatccccgag
cgcgtgcggcacacgtcggtggtcagctccacgtcagtgctgcgctcaacacaccaggag
gccagcaagtctcaactcagcccaggcatgtacgaggacgctaacgcccgacggaccccc
aactatcccagcggctccatctccagaggatcgcccctgctccgggcgcaagagggtatc
ggaggcataacagcaggcaaacccgtgtcgcatgagagaaagagcacgctaacaccgacc
cagagagacagcatcccggccaagtctcccatatccggcggtgaaccactggcttcacac
agccccttcgatccccatcaagtgtaccgggcccatctgccacctcacctggatcctagt
cttttccaccaccgtgtgctggacccagcggcgtacatgttcccgcggcagccttcccca
acaggctaccccaacacctaccagctgtacaccatggagaacacgcgccagaccatcctg
aacgactacatcacctcgcagcagatgcaggtcatcccgcggcccgacgtcgccagagga
ctgtcgcccagggaacagcagatcgccatccagtaccctcctggagccagaggtataatt
gatctagcccagatgcctcccaccatcctgttgcctcaccccggggggacaggttcccct
tccttggatcgcatcacgtacatccctggagctcagcccccttttcctcctagggttttc
tccatatctccaggacatctggcagccagcgtggagcgggagagagagagggagcgagaa
cgtgagagagagcgcgagcaccgagagcgagaaaaagagagggaaaaggagagagagagg
gaacgggaacgagacagggagcgcgagcgtgagcgcatggctgctaacgaatacatgagg
gcggctcaagagcagcctggcaggcctggtagccgtgggtttctgcgctcaccctcccca
tcgatgaggtcacaggacaggcccagtatcttccagggcaccagcaaaagtgtcatcaca
cctctgatcaggcagatgccccccacatccaccgcgggtcagacgaactcccgctacagc
acagcggccgacgcgctggccgcactggtggacgccgcagcctctgcgcctcagatggac
gtcgcgacggccaaagagggtaaacacgacagcgtcaattcccgtgacgacgtgaccgtc
tctcgacccatgcagcttccacctagcaaagctccgcttccactgtattcggatggaggg
gcgggaccagggggcagcaaagacaaaacccagcccaccaagtctcgcatagaggaggag
ctgaggcagcacggcaagaccactattaccgcagccagcttcatcgatgtcatcatcaca
cggcagatcgcatcggaaaaagactcgcgcgagagaggctcccagagctcggactcgtcc
tctagcttgccgccaagccgttacgaaccgcagaccagtggcgccatcgaggtgatcagc
ccggcgagttctccagcccaaagagaggagaagaatgaaagatccttccccccagagaag
agctctcaaccacccacaggatccgttcgagggtttgacctaggtcgatacaggcagccg
atggaacccggacccccagcaccccagcctcccaccacacagatccaccgtgtcatgacc
ctggccgaccacatctcgcacatcataacccaggactttgccaagaaccaggacttccca
ccttcctccagctcgctgccttcctcctcctcttcttcctcgacttcctctacattccaa
agctccggagcaggaggtggcggggctcgtggcaaagtgcctaatcgctacagtccagaa
aacccaggacaccctacacaccatcagaaaccaggcaacagggtgtcgcctgaaaacgca
tcggagaaacccagaaccagcaggccaggaaaatctccagagcgcactggtggagtcggc
ggtcgagccagggagagctacgagcccatctctcccccccagaactactcgggcctggag
aaacaagagagcaacatgctgcagggaagacgtgatcaggaactgtcggagcagaggacg
gactcgcgctccccgtgcagtggcagttatctgccagctttcttcaccaagctggagagc
acctctcccatggtgatgtccaagaagcaggagatcttccgcaagtctgacgtcggaaat
gcccagccgggcacagagatctttaacttaccagcagtaacgagctcaagtaacatgaac
cccaggaaccactcgttctctgatccagcccataacctcggtctggaggacataatcagg
aaagctctgatgggaaacgtggacgagagaccagaggatcaggcacagcaagctcagtct
gtgggttcttctgcgcagagcaatacagaggggcgagcggaggccagtccctcccacaac
acaggtagatactcagcaaagcagaagcttcagagcaaagccagcaacaggaagaccaag
tcacctaatcaagggcaggcttatgcaggtggagagcgaccctcctcggtttcctctgta
cattcggatggagattatcatcgccagcctccaagttggaattgggaggacaggccatca
tccacaggtcccatgcagttcccctacaaccctctgaccatgcgcatgctgagtagcaca
cctccctccatagcctgcccctctccatccatgcagtcccagcagcagctggccgagagc
gccgccgctccagcccgcgtctgggagagggagccgccgctgcttttagatgagtatgat
tccctgtcggacagcgacgactga
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integrated database retrieval system
