Trichomycterus rosablanca: 134303465
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Entry
134303465 CDS
T09921
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134303465 (nova1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134303465 (nova1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
134303465
NCBI-ProteinID:
XP_062844959
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Position
26:complement(1418817..1438068)
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AA seq
444 aa
AA seq
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MEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG
TVEALNGVHNFIAEKVREMPQSSQKSEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIG
KGGATVKSVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSS
SCLNISYSNVTGPVANSNPTGSPYANSAEVLPSAAAAAAATASTLLGQAGLASFPSAMSG
FSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASY
ASEVSGGAAHPAVHGLAGFSLGSLAAATGASNGYLNPASSPLVASSLLGTEKLAEGGKEV
LEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA
AQYLISQRITYEQGVRATNPQKVG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggtgagtacttcctgaaggtgctgatccccagctatgcagccggttcgatt
attggaaagggaggacagaccatcgtccagctacagaaagaaaccggggccacgatcaaa
ctgtccaagtctaaagatttttacccgggtacaacagagcgtgtgtgtttgatccagggt
acggtggaggcgttaaatggagttcataactttattgctgaaaaagtgcgcgagatgcca
cagagcagtcagaagagcgaaccggtcagcatcctgcagccgcagaccacggtcaaccct
gaccgcgtcaaacaggcgaagctgatcgtgcccaacagcacggccgggctcatcatcggt
aagggtggagccaccgtgaagtcggtgatggagcagtcgggcgcctgggtgcagctgtcg
cagaaacccgagggcatcaacctgcaggagcgcgtggtgacggtgagcggggagcccgag
cagaaccgcaaggccgtggagatcattgtccagaagatccaggaggatccacagagcagc
agctgcctgaacatcagctactccaacgtcaccggacccgtggccaactccaaccccaca
ggttcaccctacgccaacagcgccgaagtcctgcccagtgccgcggctgccgcggccgcc
accgcttccacgttactgggtcaggccggcctcgccagcttcccctcggccatgtctggc
ttctcgggcaacgacctgctggccatcacctcggccctgaacacactggccagttacggc
tacaacactaacactctggggttgggtctgaaccccgctgctgcctctggggtgctggcc
gcggtcgccgccagtgccaacccggcagccgccgcagctgctaaccttctcgcgtcatac
gccagcgaagtgtccggcggagcggctcacccggctgttcatggcctcgccggtttctcg
ttgggctcgctggcggccgcgacaggcgcctccaacggatacctgaacccggcatcttcc
cctctagtggcctcttcactgctgggcacagagaagctcgccgagggcggcaaggaggtg
ctggagatcgccgtgcccgagaacctggtgggcgccatccttggaaaaggaggaaagacg
ttggtggagtaccaggagctgaccggggcgcgcatccagatctccaagaagggcgagttc
atcccgggcacgcgcaaccgcaaggtgaccatcacggggtcgccagcggccacacaggcg
gcgcagtacctcatcagccagcggatcacgtacgagcagggcgtccgcgccaccaaccca
cagaaggtgggctag
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