Trichomycterus rosablanca: 134303551
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Entry
134303551 CDS
T09921
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134303551 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134303551 (exosc2)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134303551 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134303551 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
134303551
NCBI-ProteinID:
XP_062845058
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All DBs
Position
26:9670933..9783976
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AA seq
293 aa
AA seq
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MAVDMRLPSYRKQIPLSAHSKADKHLVVPGDVITSDTGFMRGHGTYMDDEKLTASVAGEV
ERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELAMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKSHFHNLPCGASVILGNNGFIWLHATPGHQDEEAGGYYTSMEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLPHQIKDILKPEIMDDIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatatgagattaccctcatacagaaaacaaataccactttctgctcattcc
aaggcagataaacacctggttgttccgggggatgtgatcacatctgatactggttttatg
agaggccatggcacgtatatggatgatgaaaagctcaccgcttcagtggctggtgaagtg
gaacgagtaaataaactgatctgtgtgcggccactcaagacgagatttaatggtgaagtt
ggggatgtggtagttggtcgcatcactgaggttcagcagaaacggtggaaagtggaaacg
aactctcggctggactctgtattgcttctatcatcggttaaccttcctggaggagagttg
aggaggcgatcagcagaggatgagcttgccatgagagactatcttcaagaaggagacctc
attagtgcagaggtccagtctgtgttttcagacggagccctttcactccatacacgcagc
ttaaaatatggcaagctcggacagggtgtgttggtgcaagtatcaccatcacttgtgaag
agacagaagtcccattttcacaatttgccatgcggagcttccgtaatattggggaacaat
ggcttcatttggctacatgccacaccgggacatcaagatgaagaggcgggagggtactat
accagcatggagccggtttcgctctcggatcgggaggtcatttcaagactgaggaactgt
ttactggccctggcagctcacaaagtgttactctatgacaccagtgtactctactgttat
gaatcctcgctgcctcaccagatcaaagacatcttaaaaccagaaatcatggatgacatt
gtgatggagacgcggcagcggcttcttgagcaagagggctaa
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