KEGG   Trichomycterus rosablanca: 134303644
Entry
134303644         CDS       T09921                                 
Symbol
polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
trn  Trichomycterus rosablanca
Pathway
trn03020  RNA polymerase
trn03420  Nucleotide excision repair
trn04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    134303644 (polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134303644 (polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    134303644 (polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trn03021]
    134303644 (polr2k)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134303644 (polr2k)
Transcription machinery [BR:trn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     134303644 (polr2k)
  RNA polymerase III system
   RNA polymerase III
     134303644 (polr2k)
  RNA polymerase I system
   RNA polymerase I
     134303644 (polr2k)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      134303644 (polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 MCM_OB A2L_zn_ribbon DUF5816 Cytochrome_C7 DmmA-like_C HypA DZR Pellino_RING Zn_ribbon_13
Other DBs
NCBI-GeneID: 134303644
NCBI-ProteinID: XP_062845188
LinkDB
Position
2:688230..693277
AA seq 76 aa
MRERKCATILVIQTFVVEMDPQKDSQPPKQQPMVYICGECHTENEIKARDPIRCRECGYR
IMYKKRTKRLVVFDAR
NT seq 231 nt   +upstreamnt  +downstreamnt
atgcgcgaacggaaatgcgcaacgatactcgtaattcaaacgtttgttgttgaaatggat
cctcagaaagattcacagcctcccaaacagcagcccatggtctacatctgtggagagtgt
cacacagagaacgagatcaaggcccgagatcccatcaggtgtagagagtgtggatacaga
atcatgtacaagaagagaacgaagaggctggttgtgttcgatgcccgatga

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