Trichomycterus rosablanca: 134303652
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Entry
134303652 CDS
T09921
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
trn
Trichomycterus rosablanca
Pathway
trn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134303652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134303652
03036 Chromosome and associated proteins [BR:
trn03036
]
134303652
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134303652
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134303652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134303652
NCBI-ProteinID:
XP_062845194
LinkDB
All DBs
Position
26:complement(1067928..1093692)
Genome browser
AA seq
1866 aa
AA seq
DB search
MSTQVLGPEPAAEGSQSGGGKLGLLINKLHTFLAVSAEQGSEHSLPGHWNGAMAKEFIEQ
QQAVAQAAEESVQPSSSSEPKAAATARSRRKPLVVTKHSGLNESDASTESGADDALSVNS
SEPDTSCLPKGTVFVQPEPVSNEVRDEFRGPEFRSKRVKQNKEFSERRRGCCEIERVNCT
ACGQQVNHFLKDSVYQHPALKVLICKSCYKYYMSDDISKDAEGMDEQCRWCAEGGSLIGC
DYCSNAFCKKCVLRNLGRRELSAILEEERKWYCYVCSPEPLVDLVLACDDVLQNLEKIWA
RKRSDRPGVMGRGMVGGGRGKPRGGRGGIGAGFTGASAPSRGLCERTQRVVDMTTSLNRS
YVDFMQSERDEEASEEEDVERAKRLMMFRTILQDLHKAHGALQQALDRELYGTKNQKPRG
KPRQRRARAPRGSGVTKELVVQLTPVPVSDSVDGANADTPAEADSLAEVKPEMKEEEEEE
AQEVMEVIEIRDDDAEVKEDEVKVEEAAEEKACTPAEEDNTEEEDEEDLEPEEDNKRSPR
VKTTPRRRPSEKPHGSIAEDSDSDEVPAVLLQTAAITIPSSDDEVGPDSDAGGSESNREV
RKKCLFGLVKTTPPCQDRNPRKRKLKERSSSSSSSSSSTSSAAGAADPNPKVRRTVGRPR
KVAKQTAESESESSEQETDTDSDDQDQKIKPLSDVALMAATTFHQQSSGDEVDVCPAPAA
ALDEDDVENRIAKQILLAKIRANLSDSDREDSSDDDMDNGGSGRQDETDTARDQEVEEEN
PANPEDSEPTDNSSDSDGCAVEIKARHRLLRYPLTPWEENSKDSSDKTTNRKQTENRNEE
ADLSAVSSDDFESAKEESALSEELSQSEDEDCSLLSNEQLNPPVEAEPHTPDRETPGDED
PEADGNTGEDSLSTPKGRRKIRRILEVQQLAKETQEALREEEERRRRLAERDRRRRQEEE
NGERSRDDNEVMIIGESTIPCPAPLVLEHNVEVNTYLLRKLKPHQRAGVRFMWDSCCESV
GKVKSSPGSGCILAHCMGLGKTLQVIAFLHTVLTCDLVELKTALVVCPLNTVLNWKSEFD
KWQRGISTRRVEVIELVTIKSVWARVETLIRWQRSGGAMIMSYETYRILTRGNQAKYAKH
RQNLRAALQNPGPDIVVCDEGHILKNETSGICKAMSSIHTRRRITLTGTPLQNNLTEYHC
MVSFVKQNLMGSLREFRNRFINPIQNGQCADSTPSDVSLMKKRVHVLHELLAGCVQRRDY
SVLTAFLPPKQEYVLSVGMTPLQCQLYRHYLQNYTAEGEGVNRLFQDFQNLSLIWTHPWC
LQRADQKGNKNKAQDSAPVPTTTGESSEPASCHNHSERREEGRTTTEEVRSMFSGPPPGW
YRRCVCDADAQLLEHSGKLVLLMEILHWAEQLQDKVLVFSQSLVSLDLIENFLRLADKAK
KEGKPSIYKGERSWVRDQDYYRLDGSTTATARKKWAQEFNSIRNKRCRLFLISTRAGSLG
INLVAANRVVVFDASWNPTYDVQSIFRVYRFGQRKPVFVYRFLAQGTMEQKIYERQVAKQ
SLSSRVVDQQQIQRHFTHSQLSELYHFQPDAHAKVHTAQPADRVLALLLQHCGRSIVSFH
EHDSLLDHREEEELSVEERKAAWDEYRAEETVQTRTHNHAAPVPDSGALHAIGGLWRKSN
KELEAMLKKGRLELLRASENIKPQCVEFFERELKKHNPQLDSEKIMQMATRAQANFERER
HRRVEIYQRKLKYQQNLIVHTQQILASRVGSANVAPPTTTPLQGFTGGVTFSATPTSQAW
GTTPQGRGRGVTPRGRALNRTPQGPGLAPQGRGSLSGSFFRLPGSRQLSHQSHGAAPQGA
AARPNR
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccaggttctcgggcctgaacccgctgccgaggggagccagagcggaggtggt
aaactgggcctcctcatcaacaaacttcacacgtttctggcagtttctgcagagcaggga
agtgagcacagcttaccaggacactggaacggtgcaatggccaaagaatttattgagcag
cagcaggcagtagctcaggctgcagaagagagcgtccagcccagcagctcctcggagccg
aaggcggcggccaccgctcgttccaggaggaagccgctggtggtgacgaagcacagcggt
ttaaacgagtcggacgcttccactgagagcggggcggacgacgctctgtcggtcaactcc
agtgaacccgacacgagctgcctgcctaaaggtacggtgtttgtgcagccggagccggtg
agtaacgaagtccgggacgagttcagaggccccgaattccgcagcaaacgagtcaaacag
aacaaagaattctctgaaagacggagaggatgctgtgaaatcgagcgagtgaactgcacg
gcgtgtggtcagcaggtgaaccatttcctgaaggactcggtctaccagcacccagcactc
aaagtgctcatctgtaagtcatgttacaagtactacatgagcgatgacatcagcaaggac
gcagaggggatggacgaacagtgcaggtggtgcgcagaaggaggaagcctgatcggctgc
gactactgcagtaacgctttctgcaagaaatgcgtgctgcggaacctgggccggcgggag
ttgtcggccatcctggaggaggagcgtaagtggtactgttacgtgtgcagcccggagccg
ctggtggacctggtgttggcctgcgacgacgtcctccagaacctggagaagatctgggcg
cgcaagcgctccgacaggcccggcgtgatgggcagaggcatggtgggcggagggcgcggg
aagcccagaggcgggcgcggagggatcggggcggggttcacgggggcctcggccccctcc
agaggactctgcgagcgcacgcagcgcgtggtggacatgacgacctcgctgaaccgctcg
tacgtggacttcatgcagagcgagagggacgaggaggccagcgaggaggaggacgtggag
cgagccaagaggctgatgatgttccgcaccatcctgcaggacctgcacaaggctcacggc
gctctgcagcaagcactagatcgtgagctgtatggaaccaaaaaccagaaaccgaggggg
aaacctcggcagcgcagggctcgggctcccagaggctcgggcgtcactaaagaactggtg
gttcagctaacgccggtaccggtgagcgacagtgtcgacggcgctaatgctgacacccct
gctgaagcagattccctagctgaggtgaagcccgaaatgaaagaggaggaggaggaggag
gcgcaggaagtgatggaggtgatcgaaattagggacgatgacgccgaggtgaaggaggac
gaggtaaaagtggaggaggcggccgaggaaaaagcctgcacgccggcggaggaggacaac
accgaggaggaggacgaggaggatttggagccggaggaagacaacaagcgctcgcctcgc
gtgaagaccacgccacgccgccggccctccgaaaagccgcacggcagcatcgccgaggac
tcggattctgacgaagtgccggcggtgcttctgcagacggccgccatcaccatcccgtcc
agcgacgacgaggtcggccccgacagcgacgccggcggctcggagtcgaaccgcgaggtg
cggaagaagtgcctgttcggtctggttaaaaccacgccgccgtgccaggaccgcaacccg
cgcaagcgcaaactcaaggagaggtcgtcctcctcatcctcatcctcctcgtccacgtcg
tcggccgccggcgcggcggaccccaatcccaaggtcaggaggacggtggggcggccgcgc
aaggtcgccaagcagacggcggagagcgagagcgagtcgagcgagcaggaaaccgacacc
gactcggacgatcaggaccagaagatcaaaccgctcagtgatgtcgcgcttatggcggcc
accacgttccatcaacagtcgtctggtgacgaggtagacgtgtgtcctgcccccgccgcc
gcgctggacgaggatgatgtggagaatagaattgctaagcagatcctgttggccaagatt
agagctaatctctccgattccgatcgagaggacagctcagatgacgacatggataacggc
gggtcgggaaggcaggatgagacggacacagcgagagaccaggaggtggaggaggagaac
ccagcaaacccagaggacagtgagcccactgataacagctctgattcagacggttgtgct
gtagaaataaaagcccgccaccgcctgctgcgctatcctttgactccgtgggaggaaaac
tccaaagattccagcgacaagacgaccaatcggaagcagacggagaacagaaatgaggaa
gcagacttaagtgcagtcagcagtgacgacttcgaatcagccaaagaggagtccgcgtta
agcgaggagcttagccaatcagaggatgaggactgcagcttgctgagcaacgagcagttg
aacccacccgttgaggctgaaccacacacacctgacagggagacacccggcgacgaggat
ccagaggccgatgggaacactggtgaggattccctgagcacccctaagggtcggaggaaa
atccgccggatcctggaggtgcagcagctggccaaggagactcaggaggcgctgagggag
gaggaggagaggaggaggaggcttgccgagagagaccgacggaggaggcaggaggaggag
aacggcgagcgatccagagacgataatgaggtgatgataataggtgaaagcaccatcccc
tgtcctgcccctctggttctggaacataacgtagaggtgaacacgtacctgctgcgtaaa
ctgaaacctcaccaacgagccggtgtgcggttcatgtgggacagctgctgcgagtccgtg
gggaaggtgaagtcgtctcccggttccggctgcatcctcgcccactgcatgggcctcgga
aaaacgctgcaggtgatcgcgttcctgcacacggtgctgacgtgtgacctggtggagctg
aagacggcgctggtggtgtgtcctctgaacactgtgctcaactggaagtccgagtttgat
aaatggcagcgcgggatttctactcgcagagtcgaggtgattgagctggtgaccatcaag
tctgtgtgggctcgcgtggaaactctgatccgctggcaaagaagcggcggcgcgatgatc
atgagttacgagacgtaccggatcctgactcgggggaaccaagccaagtatgccaagcac
cggcagaacttgcgggcagcgctgcagaaccctgggcctgacattgtagtgtgtgatgaa
ggtcatatcctgaagaacgaaacatcgggcatctgtaaagccatgagttccatccacacc
cgccggcgaatcactctaaccggaacgccactccagaacaacctcactgagtatcactgc
atggtgagctttgtaaagcagaaccttatgggctctctgcgcgagtttcggaaccgcttc
atcaaccccattcagaacggccagtgcgccgactccaccccctccgacgtgagcctgatg
aagaagagggtgcacgttctccacgagctccttgccggatgtgttcagaggcgggattat
tctgtcctgaccgctttcctgcccccaaaacaagaatacgtgctgtcggtcgggatgacg
ccgttacagtgtcaactgtacagacattacctacagaactacacagctgaaggagaaggt
gtgaacaggctgtttcaagactttcagaatctcagtttgatttggactcatccgtggtgc
ctgcagcgagctgatcaaaaaggaaacaagaataaagcgcaggattctgctcctgtccct
acgacgactggtgagagttcagaaccagcatcgtgccacaaccacagtgaacgaagggag
gagggcaggacaacaacagaagaagtgcgcagcatgttcagcggacccccgccgggctgg
tatagacggtgtgtgtgtgatgctgatgctcaacttctggagcattctgggaaattagtg
ctcctgatggagatactgcactgggctgaacaactgcaggataaagtgttggtgttcagc
cagtctctggtgtcactggacctgattgaaaacttcctgaggttggctgacaaagcaaag
aaagaggggaagccgtctatatataaaggggagcggtcgtgggtgcgagatcaggattat
tacagactggacggctcgactacagcaacagcacgaaagaaatgggctcaggagttcaac
agcatccggaacaaacgctgcaggttgttcctaatctccaccagagccggctcactgggg
atcaatctggtagcagccaatcgtgtcgtggtgttcgacgcctcgtggaatccaacgtac
gacgttcagagcatcttcagagtgtaccgcttcggtcagagaaaacctgtcttcgtctac
cgcttcctggcacaggggacgatggagcagaagatctatgagcgtcaggtagctaagcag
tctctgtcatcgcgtgtggtggaccagcagcagatccagcgtcacttcactcacagccag
ctatcagagctgtatcacttccagcctgatgcccacgccaaagtacacaccgcccagcct
gcagaccgggtgctggcgttgctcttgcagcactgtgggcggagcatagtgagcttccat
gaacacgattcgctgttggaccacagggaggaggaggagcttagcgtggaggagaggaag
gcagcgtgggatgagtaccgggcggaggagacggtgcagacgcgcacccacaaccacgcg
gcccccgtacctgattcaggtgctctgcatgctatcggcggcctgtggaggaaatccaac
aaggaactggaggccatgttgaagaaaggtcgtctggaactcctcagagcttcagagaac
atcaaaccccagtgtgtggagttctttgagcgcgaactgaagaaacacaaccctcagctg
gacagtgagaagatcatgcagatggcgactcgggctcaggctaactttgagagagagaga
catcggagggtggagatataccagcgtaaacttaaatatcagcagaatcttattgttcac
acgcagcagattctggcgagcagggtggggtcagccaacgtagccccgcccaccactaca
ccactgcagggatttacaggaggcgtaactttctcagccacgcccactagccaagcatgg
ggcaccacaccccaaggacgcggacggggcgtgactcctcggggacgggctctgaacaga
accccacagggacctggactcgctccccaggggcggggctcgttgtctggctcgtttttc
cggcttccagggagcagacaactttcacaccaaagccacggagcagcaccgcagggggcg
gccgcgcgcccgaaccgctga
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