Trichomycterus rosablanca: 134303689
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Entry
134303689 CDS
T09921
Symbol
thbs3b
Name
(RefSeq) thrombospondin-3b
KO
K04659
thrombospondin 2/3/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04145
Phagosome
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134303689 (thbs3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134303689 (thbs3b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134303689 (thbs3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134303689 (thbs3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134303689 (thbs3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134303689 (thbs3b)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134303689 (thbs3b)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Phagocytosis
Opsonins
134303689 (thbs3b)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134303689 (thbs3b)
Exosomal proteins of colorectal cancer cells
134303689 (thbs3b)
Exosomal proteins of bladder cancer cells
134303689 (thbs3b)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134303689 (thbs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
134303689
NCBI-ProteinID:
XP_062845237
LinkDB
All DBs
Position
2:complement(1035730..1048864)
Genome browser
AA seq
957 aa
AA seq
DB search
MDGESGIHKLLFLLYMLLSVHLCTSSEMKVIDALALGDASRTSAAVTDLAESLEKMQDLY
VTSTFRLHPKLGGVLLGLYSRDDGRKYLEITVIGKINKVLVRYLRSDGRLHTVNLQNPAL
SDGRSQSLMMKVGVAKRNHVSLELYVNCRLADSAHHLPLLARIPSKPESVELRTGEKNFA
RMQGSVESLKLALGGSLPKAGLLTDCSLQGDSTLHNSVGSDINAILGDHTKALIGQLIIF
NQIMGDLREDIREQTKEMSLIRNTILECQVCGFHEPQSRCQPNPCYSGVECVDVLEFPGY
RCGPCRPGTKGNGTHCQDIDECTAGPCFSPHMCVNSVKGFRCEPCPPGFSGPELGGVGME
FAQKHKQECVDVDECEAQTSRCVPNSICTNTPGSFKCGGCKAGFLGNQTTGCFLKKTCAL
LGYDPCDVNAHCVMELSSDIICVCNVGFAGNGNICGADSDLDGYPDEALPCMDNDRHCRQ
DNCVSTPNSGQDDTDGDGVGDQCDEDADGDGIKNFEDNCRLVHNKDQTNSDADSYGDKCD
NCPNVPNADQLDTDGNGVGDVCDSDIDGDGIPNMLDNCPKIPNAMQTDRDNDGVGDACDS
CAEVNDPTQSDADSDLVGDVCDTNHDTDGDGFQDTRDNCPTVPNSSQLDSDNDGVGDECD
EDDDNDGVPDALPPGPDNCRLIPNPNQKDSDGDGVGDVCEGDFDNDKVTDAKDACPENAD
ITLTDFRAFQTVTLDPQGDSQIDPNWVVLNQGMEIIQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTVTDDDYVGFVFAYQDSSSFYVVMWKQTEQTYWQNLPVRAWAEPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEATLLWKDPRNEGWKDKTSYRWSLSHRPQVGYIRVRLYEGADL
VADSGVVIDGTMRGGRLGVFCFSQENIIWSNLGYRCNDTVPYDFYLHQKQTNLRTGV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacggagagagcgggattcacaaacttttgtttcttctttacatgctgctgagtgtt
catctttgcacatcttctgaaatgaaagtgatcgatgcgttggcgttgggcgacgcctct
cggacgtcggcggcggtgacggatttggcggagagtctggagaagatgcaggatctgtac
gtgacctcgaccttcaggctccatcccaaactgggcggcgtgctgctcggcctctacagt
agagacgacggcagaaagtatctggagatcaccgtcatcggcaagatcaacaaagtgttg
gttcgatatctgcgctcggatggacgcctccacacggtgaacctgcaaaaccccgccctc
tcggatgggcggagccagtccctgatgatgaaagtcggtgtagcgaaacggaatcacgtt
agcctggagctttacgttaattgcagactagctgactccgcccatcacctgcctttattg
gctaggattccatccaagccggagtctgtggagcttcgtaccggagagaagaactttgcc
aggatgcaggggtcagtggagtctctgaagctggctctgggtggttctcttccaaaagct
ggacttttgaccgactgctcgttgcagggagactcaacactgcacaacagtgttggcagt
gacattaatgcaatacttggtgatcacacaaaggcattgattggtcagctgatcatcttt
aatcagatcatgggcgacctgagagaggacatccgtgaacagacaaaggagatgtctctg
atcaggaacaccatcctcgagtgccaagtgtgtggtttccatgagccccagtcacggtgc
cagcccaacccatgttacagtggtgtcgagtgtgtggatgtgttggagtttccaggttat
cggtgtggtccgtgtcgacccggcactaagggaaatggcacacactgccaggacattgac
gagtgcactgccgggccgtgtttctcccctcacatgtgcgtgaacagtgttaaaggattc
cggtgtgagccctgtccacccggtttctccggtccagagctcggtggtgttggtatggag
tttgctcagaagcacaagcaggagtgtgtggatgtagatgagtgtgaggctcagactagt
cgatgtgttcccaattccatctgcaccaacacgcctggatcgttcaagtgtggagggtgt
aaggcgggttttttggggaaccagacgacggggtgtttcctgaagaagacgtgtgctctg
ctcggatacgatccctgtgacgttaatgctcactgtgtgatggagctcagcagtgacatt
atctgtgtgtgtaatgtcggatttgcgggtaacgggaatatctgtggtgctgattctgat
cttgatggctatccagatgaagctctgccctgtatggataatgacagacactgccgacag
gataactgcgtgtccacgccgaattctggtcaggacgacacggacggtgacggtgtcgga
gatcagtgtgacgaggacgcggacggagacgggattaagaacttcgaggataactgccgt
ctggtgcacaacaaggaccagacgaactcggacgcggactcgtacggcgacaagtgtgat
aactgtccgaacgtcccaaacgcagatcagctggacactgacggcaacggtgtgggagac
gtctgcgatagtgacatcgatggagacgggatccccaacatgctggacaactgtccgaaa
attcccaacgccatgcagacggatcgggacaacgacggtgtgggggacgcatgcgacagc
tgtgctgaggtcaacgaccccacacagtctgatgctgacagtgacctggtgggagacgtc
tgcgacaccaaccacgacacggacggcgatggtttccaggacaccagggacaactgtccc
accgtccccaacagttctcagctggactcggacaacgacggcgtgggagacgagtgtgac
gaagacgacgataacgacggcgttccagatgctctcccgcccggaccggataactgcagg
ctcatcccgaaccccaaccagaaagattccgacggtgacggcgtgggcgacgtatgcgag
ggcgacttcgacaacgataaggtgacggacgcgaaggacgcctgtcccgaaaacgccgac
atcaccctgacggacttccgagcttttcagacggtcaccctcgacccgcagggagactcg
cagatcgaccccaactgggtggtgctcaatcaggggatggagatcatacagaccatgaac
agcgaccccggactggctgttggatacacggcgttcaacggcgtggatttcgaagggacg
tttcacgtgaacacggtgacggacgacgactacgtgggcttcgtgttcgcctaccaggac
tcgtccagcttctacgtggtgatgtggaagcagacggagcagacctactggcagaacctc
ccggtcagggcctgggccgaacccggcctgcagctgaaggctgtgaagtcccgcacgggt
ccgggcgagtacctgcgtaacgccctgtggcacaccggcgacacccccggagaggccacg
ctgctctggaaggatcccaggaacgaggggtggaaggataaaacctcgtaccgctggagc
ctgagccatcggccacaggtcggatacatcagggtccgtctgtatgaaggtgcggatctg
gttgcggactcgggcgtggtgatcgacggcaccatgagaggaggacgtctgggggttttc
tgcttctcgcaggagaacatcatctggtccaacctgggctacaggtgtaacgatacggtt
ccgtatgatttctacctccaccagaaacagaccaacctcaggacgggagtttag
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integrated database retrieval system
