Trichomycterus rosablanca: 134303825 Help Entry 134303825         CDS       T09921                                  Name (RefSeq) cadherin-1-like   KO K05689   cadherin 1, type 1, E-cadherin Organism trn  Trichomycterus rosablanca Pathway trn04371   Apelin signaling pathway trn04514   Cell adhesion molecules trn04520   Adherens junction trn05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:trn00001]  09130 Environmental Information Processing   09132 Signal transduction    04371 Apelin signaling pathway     134303825   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     134303825  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     134303825  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     134303825  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:trn03036]     134303825   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:trn04515]     134303825    04090 CD molecules [BR:trn04090]     134303825 Chromosome and associated proteins [BR:trn03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     134303825 Cell adhesion molecules [BR:trn04515]  Cadherins   Major cadherins    134303825 CD molecules [BR:trn04090]  Proteins   134303825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_pro CADH_Y-type_LIR Glucodextran_B Fibulin_C Cadherin_4 TM_ErbB1 DUF4832 Motif Other DBs NCBI-GeneID:  134303825 NCBI-ProteinID:  XP_062845320 LinkDB All DBs Position 27:complement(981095..1006401) Genome browser AA seq 1535 aa AA seqDB search MESLRTMHLAILLFLLQVAWCEYAESEPCSSGFTSHLFTFRVHRERLHRGTEVGKVLFSD CSGQTQPLFDSDDEQFQVSADGTVKLMGPITLDNGHKSFTVHAQDSAGMKHTAYVRVDLE DRDWHQKDTEEANLLQTESHSNLPVLEFPKSSGGLRRRKRDLVIPPIRIIENEKGPFPKR VAEIKSSKAKESKMVYEISGEGANLPPVGIFTIDRSTGWLSVSKPLDREVKPRYVLQVKV FSPVDPNIMEPPMEVIVEVMDQNDNRPVFTQDPFLGSVPEVSKIGFEFMTTTATDADDPN TLNGDIRYTIISQDPALPRPNMFAIHPITGAIRLNSEGLDRAKYPKYILEIQAADMEGNG LLAKGRTVITVTDGNAETDHKSEGMQLIVSQIIIPENDRGPFPKQIAQIKSSHSKKTNMV YSIKGEGADQPPVNVFSVDKSTGWLSVSGPLDREIIKQYELEAHAVSADGSVHEPPMKIH ILVIDQNDNKPVFTQPQFQESVAQASEIGFELLTVTATDADDPNSDNGEIRYTIISQDPA LPKPNMFDINPNTGAIKVNAEGLDRKKYPKYTLEVQAADMHGNGFTVRAKAVIAVTSHLA ASPSKLPAEAHFLKPTRRRFKSATSASGFWCGIKHDLCLSCARGMEAVLSVRCGLLLVLL QVVWCGYAEKEPCSPGFTSDLFHFKVYTEHLTKGTRLGTVVFDDCTGRTRTLFDSADRRF HLNSDGTVKVKRPVTLHDGHKVFTVHAWDSNGKKHTAHVKVEHVVSAGHHHGHHHGHQKH TEPVQHAQKETPSDLPVLEFPKSSGGLRRRKREWVIPPFQISENEKGPFPKHMVQIKSNK VRETKMVYEITGEGANLPPVGLFTIDRSSGWLSVSRPLDREAKPRYVLQAKAFSPVDPSI FESPMDVIVEVMDQNDNRPVFTQDPFLGSVPEVSKIGYEFMTVNATDADDPSTTNADIIY TIIKQEPLLPQPNMFDINPVSGAIRVNADGLDKEKYPKYILEIQAADMEGKGLTAVGRAV ITVSDSNDNAPQFEKSSYNVSVPENQVNVEVVRMLVTDGDEELSPAWAATFKIVTGNSAG FFSISTGPSKQEGIITTVKPLDYEKNRKIVLEVAVENDAPFALPMTTSTATVTVNVLDVN EAPVFDPVEKEISRAEDLAVDSELTVYTATDPDIEKSQKLTYRVNSDPAGWLNVNKATGV IRVKSPMDRESSFVKDGKYRATILAVDDDDHPATGTGTLVIQLLDVNDNPPTIEQREIKV CNKQSDPMTLSVTDKDGPEFGAPYRVDLQGDSRNNWTARMNDTKTGIMLTLSKQLEQGKY NVILRVYDNNDLAQDNTVLATVCDCTGGAVTCSEKAVAGFGLPWILGVLGAILALLLLVL LLLLFMRKKSTSKKEPLLADDDIRDNIYYYDEEGGGEDDQDYDLSVLHKGLDNRPDVFRN DVAPTFMSAPQYRPRPANPDEIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSEAGSL SSLHSDSSGDQDYDCLHEWGPRFKKLADMYGGGED NT seq 4608 nt NT seq  +upstreamnt  +downstreamnt atggagtctctaagaacaatgcatttggcaattttacttttcttacttcaggtggcttgg tgtgagtatgcggagtctgaaccatgttcctctggcttcacttctcatctcttcaccttc agagtccacagagaacgcctgcacagaggcacagaggttgggaaagttcttttcagtgac tgcagtggacagacgcagcccctctttgactcggatgacgagcagtttcaagtgagcgcc gacggcactgtgaaactgatgggaccgatcactcttgataacggtcacaagtcattcacc gtccatgctcaggactccgcgggcatgaaacacaccgcttatgtgagagtggatctggag gacagagactggcatcagaaagatacagaggaagccaaccttttacagactgaatcccac tcaaatcttccagtccttgagtttccaaaatcttcaggagggttgaggaggagaaaaaga gatttggtgattcctccaatacgtatcatagagaatgaaaaggggccttttcccaagcgg gtggccgagatcaaatccagtaaagccaaagaatcgaagatggtgtatgaaatcagtggt gagggtgcaaacctgcctccagtagggattttcaccatagacagatccactggttggctc tctgtgtcaaagcctctagacagagaggtgaaacctcgttatgtgcttcaggttaaagtg ttttcgccggttgaccccaatataatggaacctcccatggaggtaatcgtggaggtgatg gatcagaatgataatcgccccgtcttcacccaagatcctttccttggcagcgtaccagaa gtttcgaaaataggatttgagttcatgaccacaacagctaccgatgcagacgatcctaac actctcaacggcgatatcagatacaccatcatcagtcaggatccagccctgcctcgacca aacatgttcgccatccacccaatcactggagcgatccgactgaattctgaaggactggac agagcgaaatatcctaaatacatcttggagattcaagcagcagatatggagggtaacggc ctcctagccaaaggaagaactgttattactgtcacagacgggaacgctgagactgatcac aaatctgaagggatgcagttgatcgtttcccagattatcatcccagagaacgacagaggc ccttttcccaagcagatcgcccagatcaagtccagtcattccaaaaagactaacatggtg tacagcatcaagggtgaaggggctgaccagcctccggtgaatgttttcagtgtggataaa agcactggttggctctctgtgtcaggtcctctagaccgagagataataaaacagtacgag cttgaggcccacgctgtctcagctgatggcagtgtacatgaacctcctatgaagatccac atcctcgtgattgaccagaatgataacaagcctgtgtttacccaacctcagttccaagag agtgtagcacaagcttcagagataggatttgagctcctgaccgtcacagccaccgatgcg gacgatcctaactctgacaacggcgaaatcagatacaccatcatcagccaggatccagcc ctgcctaaaccaaacatgttcgatatcaacccaaacaccggagcgatcaaagtcaacgct gaaggactggacagaaaaaaatatcctaaatacaccctggaggttcaggcagcagatatg catggtaacggcttcaccgtgagagctaaagctgtaatcgctgtaacaagtcacctggca gcgtcaccgtcgaaactacctgctgaagctcatttcctcaaacccacacggagaaggttt aaatctgcgaccagtgcgagtggattttggtgtggaattaaacacgatctgtgtttgagt tgtgctcggggaatggaggctgtattgagtgtgcggtgtggacttctcctggttttatta caggttgtttggtgcggatatgcagagaaggagccatgttctcctggcttcacttctgat cttttccacttcaaagtgtacacagaacacctgaccaaaggcacaaggcttggcacagtt gttttcgacgattgcactgggagaacgcggaccctcttcgactcggctgacaggcggttt catttgaacagtgatggcacagtgaaggtcaagaggccggttactcttcatgacggtcac aaggtcttcacggttcatgcttgggactccaatggcaagaagcacactgcacatgtgaaa gtggaacacgtggttagcgctggccaccatcatggccaccatcatggccatcaaaaacac actgagccagtccagcatgcacagaaagaaaccccctccgatcttccagtccttgagttt ccaaaatcttcaggagggttgaggaggagaaaaagagagtgggtgattcctccattccaa atctcagagaatgaaaaggggccttttcccaagcacatggtccagatcaaatccaataaa gtcagagaaacgaagatggtgtatgaaatcactggtgagggtgcaaacctgcctccagta gggcttttcaccatagacagatccagtggttggctctctgtgtcaaggcctctagacaga gaggcgaaacctcgttatgtgcttcaggctaaagctttttcaccggttgaccccagtata tttgaatctcccatggatgtaatcgtggaggtgatggatcagaatgataatcgccccgtc ttcacccaagatcctttccttggcagcgtaccagaagtttcaaaaataggatacgagttc atgacagtcaatgccaccgatgcggatgatcccagcactacaaatgcagatatcatatac accattatcaaacaggagccgctacttccacaaccaaacatgttcgatatcaaccctgtt agcggagccatccgagtcaatgctgatgggctggacaaagaaaaatatccaaaatacata ttggagattcaggcagcagatatggagggtaaaggcctcacagccgtaggaagagctgtt attactgtatcagacagcaacgacaacgcaccccagtttgaaaagtcttcgtacaatgtg tctgtaccggagaaccaagtgaatgttgaggtggtgagaatgctcgtcacagatggagat gaggaactctcacctgcctgggcagcaacgttcaagattgttactggtaacagtgctgga ttttttagcattagcactggtcctagcaaacaggagggcatcattactactgttaagccg ctggattatgagaagaacagaaagatcgttctggaggttgctgtggagaacgacgctcct tttgctttacccatgaccacctctactgccactgtcaccgtcaacgttctggatgtgaac gaggctcctgtgttcgacccagtggagaaggagatttccagagctgaagatctggcggtt gatagtgagctgaccgtgtacaccgccaccgatcctgacatagaaaagtctcagaaactg acgtatcgtgtgaacagtgatccagccggctggctgaacgttaacaaagcaactggagtg atcagggtcaagagtccaatggacagagagtctagttttgtaaaagatggcaaatacaga gcaacaatcttggctgttgatgatgacgaccatccagcgaccggtacaggaactcttgta attcagttgttggatgtaaatgataatcctcccaccatcgaacaaagagaaattaaagtt tgcaataagcagtcagacccgatgacgctgtctgtgactgataaggacgggcctgaattt ggtgctccatatagagtggatctgcagggagatagtaggaacaactggactgccaggatg aacgatacaaaaactggaattatgcttacactttcgaagcaactcgagcagggcaaatac aacgtcattctcagggtgtatgacaacaacgacctcgcgcaggacaacactgtcctcgcc actgtgtgtgactgcacaggaggagcggtgacgtgttcggagaaagctgtggctggcttc ggtctcccctggatccttggagttcttggagctattctcgctctgctcttgctggttctg ctgcttctcctgttcatgaggaagaaaagcacttcaaagaaggagcctcttcttgcagat gacgatatccgagataacatctactactacgatgaggaaggaggtggagaggatgatcag gactatgatttaagtgttctacacaagggccttgacaaccgtcctgatgtgtttcgtaac gacgtggctccaaccttcatgtctgcgccacaatatcgaccacggcctgcaaacccagat gagattggcaactttattgatgataatctaaaggcagctgataacgaccctaccgcccct ccctacgactccctgctggtgttcgattatgaaggtggaggatcagaggcaggatccctc agctccttacactctgacagctctggagatcaggactacgactgtctccacgagtgggga ccacgattcaagaagctagccgatatgtacggaggaggagaggactaa

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