Trichomycterus rosablanca: 134303827
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Entry
134303827 CDS
T09921
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
trn
Trichomycterus rosablanca
Pathway
trn04020
Calcium signaling pathway
trn04260
Cardiac muscle contraction
trn04261
Adrenergic signaling in cardiomyocytes
trn04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
134303827 (slc8a1a)
04020 Calcium signaling pathway
134303827 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
134303827 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
134303827 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134303827 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134303827 (slc8a1a)
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
134303827 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Others
134303827 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
134303827
NCBI-ProteinID:
XP_062845322
LinkDB
All DBs
Position
27:3286474..3300941
Genome browser
AA seq
968 aa
AA seq
DB search
MGQSDTLAFCPFVLKLALFVILFHDLQPVTAGGSKPHDGLIFSNKTETCSGSNECKEGVI
LPIWKPENPSFGDKLARATIYFVAMVYMFLGVSIIADRFMASIEVITSQERQITIKKPNG
ETTTTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGELGPNTIVGSAAFNMF
VIIGLCVSVIPDGDHRKVKHLRVFFVTAAWSIFAYTWLYLILAVISPGIVEVWEGLLTLF
FFPICVVFAWVADRRLLFYKYVHKRYRVGKQRGIIIETEGEPENPPKNDVEMDGQMLNFQ
GGEFLDGSVDTAFEMSEEETRREMARILKELKQKHPEKEMEQLIEIANYQLLNQQQKSRA
FYRCQATRIMTGAGNILKKHAADQARKAIGTYELRSEVSDNDLSSKIFFDPGTYQCLENC
GSVAINVVRRGGDLTNTVSVNYRTEDGTANAGSDYQFSEGTIVFKPGETEKELRVKIIDD
DIFEEDEHFLVHLSNVRVVSEGPNHDNSVSNHVDSLAGLGLPSTATVTIFDDDHAGIFTF
EEPVVNVSESIGVMEVKVVRMSGARGVVLVPYKTIEGTAKGGGEDFEDTYGVLEFQNDEI
SKTIQINIIDDEEYEKNKNFFLEMGEPKLIEMSARKAVLLNECGSFLKTDTQLFGRDMYR
KVQGRDNLTSPNIITITDEGAKRTLSQKEEDVRRIAELGRPSLGEHIRLEVIIEESYEFK
STVDKLIKKTNLALLVGTNSWREQFVEAITVNSGDDDEECGEEKLPSCFDYVMHFLTVFW
KVAFAFVPPTDYWNGWACFIVSISMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGT
SVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAMFHQWHGQYFRVAPG
TLAFSITLFTIFAFVCIAVLMYRRRPEIGGELGGPRRAKRITSGLFFSLWLLYIVLSSLE
AYCMIKGF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggacaatcagacactttagctttctgcccttttgtgcttaagcttgctctgttcgtg
attctcttccatgatctgcaacctgtcactgcaggtggctccaagccacatgatggtttg
atcttttccaataaaacagaaacatgctctgggagtaatgaatgcaaggaaggcgtgatt
ctgccaatatggaagccagaaaatccatcatttggagacaagttggcaagagccacaatc
tattttgttgcaatggtgtatatgttcctaggggtctccatcattgcagatcgtttcatg
gcatctatcgaagtcatcacctcacaggagagacaaatcactattaaaaaacccaacggg
gaaacgacaaccactaccgtacgcatttggaacgagaccgtgtcaaatttgactcttatg
gcattaggttcgtctgctccagagatcttgttatctgttgtggaggtttgcggacacaac
tttgatgcaggcgagcttgggccgaacaccatcgtgggcagcgcagccttcaacatgttc
gtaattattggactttgtgtttccgtcattccagatggtgaccatcgcaaggtaaagcat
cttagagtgttcttcgtaacggcagcttggagtatatttgcttacacttggctatacttg
atcttggctgtgatttctccaggaattgtggaggtttgggagggtctccttactctcttt
ttctttcctatatgtgttgtatttgcatgggttgctgaccgaaggcttctgttctacaag
tacgtccacaaaaggtacagagtcggaaagcagcgtggaataatcattgaaaccgaagga
gagccagaaaacccgccaaaaaatgatgttgagatggacggacagatgctaaactttcag
ggaggggaatttttggatggatcagtggatacagcctttgaaatgagtgaagaggagacc
aggagagaaatggcaaggattttaaaggaactgaaacagaaacatccagaaaaagagatg
gaacagctgattgagattgctaactaccaacttctcaaccagcagcagaaaagtcgagca
ttttatcgctgccaggctactaggataatgactggcgctggaaacatcttgaagaaacat
gctgcagatcaagccaggaaagctattggaacatatgaacttcgctctgaggtttcagat
aatgatctttcctctaagatcttctttgaccctggtacataccagtgtttggaaaactgt
ggctcagtagctataaatgtggttcgtcgtggtggagatttgacaaacacggtgtctgtg
aattaccgcacggaggatggtaccgctaacgcaggctctgattaccagttctcagagggc
actattgtctttaaaccaggtgaaactgagaaagaacttagagtgaagatcattgatgat
gacatctttgaagaggacgagcactttctggtccatctcagcaacgtcagagttgtctct
gagggaccaaaccatgacaattctgtgtccaatcatgtagacagcctggcaggactggga
cttccatcgacagccactgtgaccatttttgacgacgatcacgctgggatctttacattc
gaggagccagtggtcaatgttagcgaaagcatcggtgtgatggaagtgaaagtggtgagg
atgtctggggctcgaggggttgtgctggttccctacaaaactattgaaggaacagctaaa
ggaggaggagaagactttgaggatacctacggagtcctggaattccagaacgatgagatc
tccaaaactattcagattaatatcattgatgatgaggagtatgaaaaaaacaagaacttc
ttcctggagatgggagagccgaaactgatcgaaatgagtgcgagaaaagctgtgttgctc
aacgagtgtggtagcttcttgaagacagatacgcagctctttgggagagacatgtaccga
aaagtgcagggtagagacaacctgacttctcccaacatcatcaccatcacagatgaagga
gcgaagcgaactctttctcaaaaggaggaggatgtgaggaggattgctgagttgggacgg
ccatcacttggagaacatatcagattggaagtcattattgaggagtcgtacgagttcaag
agcacagtagataaattaataaagaaaaccaacctggcacttctggtggggaccaacagc
tggagagaacagtttgtggaggccattacagttaattcaggagatgacgatgaagaatgc
ggtgaagaaaagctgccgtcctgttttgactacgtcatgcactttctgacggtgttctgg
aaggtcgcgttcgcatttgttcctccaaccgattactggaatggctgggcgtgtttcatc
gtctccatctccatgatcggtcttctaactgcttttattggagacctggcttctcacttc
ggctgcactataggcttgaaggattcggtgacggccgttgtgtttgtcgctcttggcact
tctgtcccagatacctttgccagtaaggtggcagcgatacaggatcagtatgccgacgcc
tccatcgggaatgtgacgggcagtaatgctgtgaatgtgtttctgggcatcggcgtggcc
tggtccatcgctgccatgtttcaccagtggcacggccagtattttcgtgtagccccgggc
acgctggccttctccatcaccctctttaccatctttgctttcgtctgcatcgctgtgctc
atgtatcgtcgccggcccgagatcggaggggagttgggtgggccgcggagggccaaacgc
atcaccagcggcctgttcttcagtttatggctcctctacatcgtcctgtcttcgcttgaa
gcctactgcatgatcaagggtttttaa
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