Trichomycterus rosablanca: 134303858
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Entry
134303858 CDS
T09921
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03030
DNA replication
trn03420
Nucleotide excision repair
trn03430
Mismatch repair
trn03440
Homologous recombination
trn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134303858 (rpa3)
03420 Nucleotide excision repair
134303858 (rpa3)
03430 Mismatch repair
134303858 (rpa3)
03440 Homologous recombination
134303858 (rpa3)
03460 Fanconi anemia pathway
134303858 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134303858 (rpa3)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134303858 (rpa3)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
134303858 (rpa3)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
134303858 (rpa3)
MMR (mismatch excision repair)
134303858 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
134303858 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
DUF7572
Motif
Other DBs
NCBI-GeneID:
134303858
NCBI-ProteinID:
XP_062845382
LinkDB
All DBs
Position
2:1736554..1739398
Genome browser
AA seq
122 aa
AA seq
DB search
MTGVSESPKVRINSSMLSQYVSRPVCFIGRVEKVNPTGKSFTLSDGEGKMASVELNDPLE
EELSGIVEVVGMVSNKGTIMASSYTIFRDEKGISFDLELYNEGLKVVHDFPQCYPFEVST
SG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagtgtctgagtctcctaaagttcggataaacagctcgatgctttctcagtat
gttagcagacctgtgtgtttcatagggcgtgtggagaaggttaatccgactggaaagtcg
ttcacgttgtcagatggagagggaaagatggcatcggtggaactcaacgatcctctggag
gaagagttgagtggaatcgtagaagtggtcggcatggtgtccaacaaaggaaccatcatg
gcttcatcgtacaccatcttcagagacgagaaaggaatctcgttcgatttggagctgtac
aacgaagggctgaaggtcgtgcatgattttcctcagtgttacccgttcgaagtttcaacg
agtggttaa
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