Trichomycterus rosablanca: 134303868
Help
Entry
134303868 CDS
T09921
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134303868 (atg13)
04136 Autophagy - other
134303868 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134303868 (atg13)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134303868 (atg13)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134303868 (atg13)
Atg1 complex
134303868 (atg13)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134303868 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
134303868
NCBI-ProteinID:
XP_062845388
LinkDB
All DBs
Position
27:11176057..11183405
Genome browser
AA seq
510 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFVLKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIPE
VTHEAKKALAGQLPSVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYTR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGIVGTPI
GTLTLSCAYRTNLALVSSRQFERTGPIMGIIIDHFVERPFGNTALMHPCNYRCFRAPGEE
DIYAGVEDSQEVCTTSFSTSPPSQLCASRLSYQTALLGGDLCHPAAGIAATVAHPHQIVV
PGKEGGVPQVLVQPSPGTQADHGRVPETPHQPPPSSYSSGDTDVLIRSSEAKRASSSHAI
ETTFTRKVGAFVNKPSTQVTTASLDLPFAAFAQRTYDLEENDPMVQPPPSPTPSSPLQDS
LHSQSSSQSGGQAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLASLSIDVSAQS
MAEDLDSLPEKLAIYEKDIEEFDAFVDTLQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatctgagcccacaggacaagaaagacttggacaaattcatcaaatttttt
gtcctaaagacagtgcaagtgatcgtgcaggcacggctgggcgagaagatctgcactcgc
tcttcttcatcccctacaggctcagactggttcactttggctattaaagacattccagag
gtgacccatgaagctaaaaaagctctggctgggcagctgcccagtgtcggacgctctatg
tgtgtcgagatctccctgaaaacctcagagggggattcgatggaactggaaacatggtgt
ttggagatgaacgagaagtgtgaaaaagacattaaagtgtcctacacggtttatacacgc
ctgtccctgctgctcaaatctcttctggcaatcacgagagtcactcctgcctacaaactg
tcacgcaagcaaggacacgactatgtcattctgtacaggatatattttggagatgtgcag
ctaacagggctcggtgaaggtttccagacagtacgtgtaggaattgtgggtactcctata
ggtacactcaccctgtcctgtgcataccgcaccaatctcgctctggtgtcctccaggcag
tttgagaggaccggccccatcatgggcatcatcatagaccactttgtggagcgcccgttc
ggcaacaccgcccttatgcacccctgcaactacaggtgcttcagagctccaggtgaggaa
gatatttatgctggggtggaagactcacaggaagtgtgtaccacctcgttttccacctcc
ccaccttctcagctttgcgcttcccgactttcatatcagacggcacttttgggtggtgac
ttgtgtcatcctgcagccggcatcgctgctaccgtcgcccacccccaccagatagttgtt
cctggaaaagagggaggtgtcccacaggttttggttcagcccagtcctggaacacaggcg
gaccacggtcgtgtcccagagacaccccaccagccccctccctcaagctatagcagtggc
gatacggacgtgttaataaggagcagtgaagcgaagcgcgcgtcctcctcacacgccatc
gagacaacattcaccaggaaagtaggagcttttgtcaacaaaccctctacacaggtgacc
actgccagtctcgatctgccgttcgctgcgtttgctcagaggacttacgacctagaggaa
aacgaccccatggtccagccgccaccatcgcccactccctcctctccattgcaagacagc
ctgcactcacagagctccagccagagcggtggtcaagcacaagacgactttgtcatggtc
gattttaaaccagcattctctaaggatgacttgttgccaatggacctgggtactttttac
agagagtttcaaaacccaccacaactcgccagcctctccattgatgtcagtgctcagtcc
atggctgaagacctggactcattgccagagaaactggccatctatgaaaaggatatcgaa
gagttcgatgcgtttgtggacacactacagtag
DBGET
integrated database retrieval system
