Trichomycterus rosablanca: 134303932
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Entry
134303932 CDS
T09921
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134303932 (cilp)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
134303932 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarboxypepD_reg
ig
CarbopepD_reg_2
TSP_1
V-set
Ig_5
Ig_4
DUF7352
Motif
Other DBs
NCBI-GeneID:
134303932
NCBI-ProteinID:
XP_062845477
LinkDB
All DBs
Position
27:13768843..13780513
Genome browser
AA seq
1147 aa
AA seq
DB search
MAYPIKWLFLFFLCGISGAFTQDAYEWTTWFNVDHPGGKGDYEQLDAIRFYYRARVCDAP
RALEARTTEWIPAHKTGQRVHSEPSVGFWCINAEQPDGKNCSNYAVRFLCPADMKSETQE
VWNPWSDWTPCHAQCNQVAVQVRSRNCKIHSKQCNGPNVEGRQCKGPTCPVCALQCVMGK
VNSDCSACICQDHTVLGSVRSAGSLPAPRAAILLSGTSPKLLTLTDHNGHFRAPGVCPDG
NTTLTIKLQNHTPQTISMPASSELTTVLHVKMDRAKKLYVEKNPESKARKEGQTAAFCCK
VSGSPEPEQYQWFYNGNPLKNQNDKTLVLRNLRLDQAGEYYCRASNENGAVKSKPAVLTI
TGQDEPSCNPDPEPHMIQLPHDCVQNETNSLYYNIGRCPVRTCTGQLDNGIRCHDPVSFC
CGVSKMEERQITCQGYELPIMVVTQCGCKKCVDLKATVRGRAVAADTGEPMRFGHIFMNG
ERISRTGYKGTFSIQVPTDTERLVLTFVDNMQKFVNTTKVLLFNTKGGAVYHEIKLLRKK
PPVTIRSTETNKLQLGEVQGKEPMAEIEIPPNAFYKQNGEVFVGNVQASVTFLDPRDVST
AAAAQSDLNFVGAEGDTLPLRTYGMFSVDFRDEQDGESLNAGEVKVRLDAAQVKMPEHLK
TMKLWSLNPENGLWEEEGQFQVEKKQRGKREERTFLIGNMEIRERRLFNLDVPENRRCYV
KVRAFRSERFMPSEQVEGVVITLINMEPTPGYATNPRAWGRFDSVITGPNGACLPAFCDE
QRADAYMAYVMANLGGEELEAVASAPKFNPNTIGVPQPFLNKLNYRRTDHDDTRVKKTAF
SINVAKPSPNAAEEANGPIYPFENLKECEEAPFNAPHFRFSRVEGDRYDYNTVPFNEDDP
MSWTEDYLSWWPKPTEYRACYIKVKVNSPHEINIRSRNMGGTHPRTTGQLYGIRDTRSIR
DMDQSGVSAVCLEFKCSGMLYDQERVDRTLVKVMLQGNCKRDVVNSMLKEYLVNHSPLAV
NNDTSEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFEGTSDGASRVMKSHQGVA
MTFSCGDKEVTRQSVFQQLQNPSGRVVAGGSRPGRGNRRQRGDSTATVRNSRRRSTRDPN
SRLLTRG
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcctacccgatcaaatggctctttctcttcttcctctgtggaatttctggtgctttt
actcaagatgcctacgagtggacgacctggtttaacgtggaccaccctggagggaaggga
gactacgagcaactggacgccatccgtttctattaccgcgcccgcgtgtgcgatgccccg
cgagccctggaggcccgcaccacagaatggattccagcacacaagactggacagagggtg
cattctgagcccagcgtgggcttctggtgtatcaatgctgaacaacccgacggaaagaac
tgctccaattacgccgttcgcttcctgtgccctgcagacatgaagtcagaaactcaagaa
gtgtggaacccttggtcagactggacgccttgtcatgcacaatgcaatcaggtggccgtt
caggtgcgctccagaaactgtaaaattcattccaagcagtgcaatggtcccaatgtagaa
ggaagacagtgcaaaggacctacatgtccagtttgtgctctgcagtgcgtgatgggcaag
gtcaactcagactgcagcgcctgcatctgtcaagatcacaccgtcctggggtcggtccgt
agcgccgggagtctcccagctcccagggcagccatcctcctctcgggcaccagccccaaa
cttctcactctgactgaccacaacgggcacttccgggcgcctggggtctgcccggacggc
aacaccacgctcacgatcaagctgcagaaccacacgcctcaaacaatcagcatgccagcg
agctctgagctgaccaccgtacttcacgtgaagatggacagagcaaaaaaactgtatgtg
gaaaagaacccggagtccaaagccaggaaagagggtcaaactgctgccttctgctgcaag
gtttctggctcacctgaacctgaacagtaccaatggttttacaatggaaatccactgaaa
aaccagaatgacaagactctggtactgaggaacctcagactggaccaggctggagaatat
tactgcagagccagtaatgaaaatggagctgttaaatccaaaccagccgtgctcacaatc
acaggtcaagatgaaccctcgtgtaacccagatcctgaaccacacatgatccagctgcct
catgactgcgttcagaacgagacaaactcactttattacaatattggaagatgccctgta
agaacatgcaccggccagttggacaacggtatccgatgccatgatccagtatccttctgc
tgtggggtctccaaaatggaagaaagacagataacatgtcagggctatgaattacccata
atggtggtcacccagtgcggctgcaaaaaatgtgtagacctgaaggcgacagttcgtggc
cgcgccgttgctgcagacactggggaacccatgaggtttggacatatcttcatgaacggt
gagaggatcagtcggactggatataagggcactttttccattcaagtacccacagacacc
gaaaggttggttctcacttttgtggacaacatgcagaagtttgtaaacaccactaaagtg
ctcctgttcaataccaaaggtggagccgtgtatcacgagatcaaactgctcaggaagaag
cctcctgttaccatccgctcaacagagacaaacaaactacagcttggagaggtacagggt
aaggaacccatggctgagattgaaatcccacctaatgcgttctacaagcagaacggagag
gtctttgtaggtaacgtgcaggccagcgtaaccttcctggaccctagagacgtatcaaca
gcagcggctgctcagagcgatctcaactttgttggcgctgaaggagacaccctgccctta
cgaacctatggtatgttctcagtggactttagggatgaacaggatggcgagtctcttaac
gccggcgaggttaaagtgcgtctggatgcagcccaagtgaagatgcctgaacatctaaag
acaatgaagttgtggtccctcaaccctgagaatggtctttgggaggaagaggggcagttc
caggtggagaaaaaacaaagaggtaagcgagaggaaaggacgttcctcattggaaacatg
gaaatcagagaaagaaggctgtttaacttggatgtgcctgaaaacaggagatgctacgtc
aaggtccgggccttccgaagcgagcgcttcatgccaagtgagcaagtcgaaggtgtcgtg
atcactctgatcaatatggagccgacacctggttatgcaaccaacccacgtgcatggggc
aggttcgacagcgttatcactggtcccaacggggcgtgtctaccagccttctgcgatgag
caaagagcggacgcgtatatggcttacgtcatggccaatctcggaggggaagaactggag
gcagtagcttctgctccaaaattcaatcccaacaccattggtgtccctcaaccgtttttg
aataagctcaactacagaagaacagaccacgatgataccagagtcaagaagacggcgttc
agtatcaacgtagcaaaaccaagcccaaacgccgctgaagaagcgaacggtccgatctat
cccttcgaaaacctgaaggagtgcgaggaagctccattcaacgcgccccactttagattt
tcaagagtcgaaggagatcgctacgactacaacacggttcccttcaacgaagatgatccg
atgagttggacagaagactacttgagctggtggccaaaaccgacagaatacagagcttgt
tacatcaaagtcaaagtcaacagtcctcacgagatcaacattcgttctcgcaacatggga
ggcacccacccaagaaccactggccagctgtacggcattcgtgatacacgcagcatccgt
gacatggaccagtcgggcgtctcggccgtctgtctggagttcaaatgcagcggcatgctt
tacgaccaggagcgagtggaccgcacgctcgtcaaggtgatgctgcaaggaaactgcaag
cgagacgttgtcaacagcatgctgaaagaatacctggtcaatcattcgccactggctgtc
aacaacgacaccagcgagttcaccatgctcgctccgctggatcctctcggacacaactac
ggcatctacaccgtcaccgaccaagatcctcgcaccgccaaggagatagcacttgggcgc
tgctttgaaggtacgtcagacggagcatcaagagtcatgaagagccaccaaggcgtggca
atgacgttctcctgcggcgacaaagaagtcaccaggcaaagcgtgttccagcagctccag
aacccatcgggccgggtcgtggcaggaggttctcgaccagggagaggaaacaggaggcag
agaggagactccacagcaactgttcgaaacagccgacgaaggagcacccgcgatcccaac
agtcgcctccttactaggggttaa
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