Trichomycterus rosablanca: 134303986
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Entry
134303986 CDS
T09921
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04217
Necroptosis
trn04622
RIG-I-like receptor signaling pathway
trn04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134303986 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134303986 (cylda)
04625 C-type lectin receptor signaling pathway
134303986 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134303986 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134303986 (cylda)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134303986 (cylda)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C67
134303986 (cylda)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134303986 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
134303986
NCBI-ProteinID:
XP_062845569
LinkDB
All DBs
Position
27:14089771..14123373
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AA seq
951 aa
AA seq
DB search
MSSALWSQEKGASSPRDDWRFFILLKECVVEKAAQKVVRVPRGSLGQACPERTSLGRPLP
TAKGKRSLRILDQSNVVVSVDERDTLELDETLAELLFPITNCEERHGLLCDTSRLQRAHA
IRCGSRVRVQLRSGDPPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVAVDKLELWEDEELEVDHLSLVDNEPEAEGDYPPLEINSRVMVQTRDG
PERGTVIFCDLLPGNESLGYYVGVYMDNPIGDWDGYFDGKQLCNFASHDHTRLVPICDIM
PEYPMQDQRSSKTSFTLRGSTEKLGSQAKPKNKGLQAASRSKSEFYYTLNGSSVDSPAQC
KSKSTWYIDEVGEDPAKSLTETPPDFNQASTPPRAPLTAPSLSSDSKFHSLPFSLSRKSG
PNESMNHGPLSLSVQSVMGEQPESPAPLTAPSPRPASPPKGQPGLEVGSLVEVKENPPLC
GVIRWVGLPPGLLEPLAGLELEEECVGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDSRF
PSQHHSPNPIERCNSIAFGGYLSEVVNENTPPRTEDDGLEVMIGKKKGIQGHYNSCYLDS
TLFCLFSFSSVLDTVLLRPKSKTDVEYYLETQELLRTEIVNPLRIHGYVCATKIMKLRRI
LEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKDKV
LVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLEDTP
RECRICGGLALYECRECYEDADITAGKIKQFCEKCNTQVHLHPRRKNHRYSKLSLPKELQ
EGTWRQATFPRQQMELFAVLCIETSHYVAFVKYGSASSSWLFFDSMADRDGGQNGFNIPQ
VSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgctgtggagccaggagaagggggcgagcagcccaagagacgactggcgc
tttttcatactgctgaaggaatgcgtggtggagaaggcggcgcagaaagtggtccgcgtg
ccgcgcggcagcctgggccaggcgtgtcccgagcgcaccagcctagggcgcccgctgcct
accgccaagggcaagcgcagcctgcgcattctggaccagagcaacgtggtggtgagcgtg
gacgagcgcgacacgctggagctagacgagacgctggccgagctgctcttccccatcacc
aactgtgaggagcgccacgggctgctgtgcgacacctcacgcctccagagggctcatgcc
atccgctgcggctccagggtgcgcgtgcagctgcggtctggtgacccaccgttgcccgga
gttgtgagatttaaaggggcactgctgcctgaccgggcactgtccgggatctggttcggc
gtcgagctactggaggagggtcgcggtcagggtttcaccgagggctcgtaccagggccgg
cagctgttccgctgcgaggacgagtgcggcgtgttcgtggccgtcgataaactcgagctc
tgggaggacgaggagctggaggtggatcacctgagcctggtggataacgagccggaggcg
gagggagattacccgccgctggagatcaactcgcgcgtgatggtgcagacgcgcgacggg
cccgaacgcggcaccgtcatcttctgcgacctgttacctgggaacgagagcctcggctat
tacgtcggggtttatatggacaatcctatcggagactgggacggctatttcgatgggaaa
cagctgtgtaatttcgccagccacgatcacacccgtctcgtgcccatctgtgatatcatg
ccagaataccccatgcaggaccagaggtcgtccaaaactagctttactttaagagggagc
actgagaagttggggagccaggccaaaccaaagaacaaaggtctgcaggctgccagcagg
agcaagtccgaattttattatacgctaaacggcagctcggtcgattcaccggctcagtgc
aaatccaaaagcacgtggtacatagatgaagtgggcgaagatccggccaagtctctgaca
gaaacgcctcctgactttaaccaagcctcaacgcctcctagggcgcccctcaccgccccc
tcgctgtccagtgacagtaagttccactcgttgccctttagcctgtctcgcaagagcggc
cccaatgagagcatgaaccatgggccgctttcactgtccgtccagtctgtcatgggagag
cagccggagtccccggcccctctgactgccccatctccaaggccggcttcacctcccaaa
ggacagccaggcttagaggtcggttcgctggtggaagttaaggagaacccgcccctgtgt
ggggtgatacgatgggtcggcctgccgccgggtcttctggagcctcttgcagggctggag
ctggaagaagaatgtgtaggatgcaccgacggcacatttaaaggcacgcgctactttacc
tgccctccaaagaaagctctgttcgtcaagctgaagtgctgccgcccagattcccgcttc
ccctcacagcaccactcgcccaatcccatcgaacgctgcaattccatagcgttcggtgga
tacctgagcgaggtagtgaacgagaacacgccccctcggacggaggacgacggcctggag
gtgatgatcggcaagaagaaaggcattcagggacactataactcctgctacctggactcg
actctcttctgtctgttctcatttagttctgtgttggatacggtgttactgaggcctaag
tcgaaaacggatgtagaatattacctagagacacaggagctgctacgcactgaaatagtc
aacccactgcgaatacatggttacgtttgtgccactaagataatgaagttgcgaaggatc
ctagaaaaggtggaggcagcatcagggttcacatcagaggagaaagatccggaagagttc
ctcaacattcttttccaccacattctgagggtcgacccactgcttaaactacggtctgca
gggcagaaagttcaggactgttacttctatcagatcttcatggataagaaagataaagtg
ctggtgcccactagccaacagctgctggagtggtcttttatcaacagtgacctcaaattt
gctgaggctccttcctgtctcatcatccagatgcctcggtttgggaaagactttaagatg
ttcaataaaatctttccgtctctggagctggacattacagatcttctggaggacacaccc
agagagtgtcgtatctgtgggggtttggctctttacgagtgcagggagtgttatgaagac
gctgacattacagcgggcaagattaagcagttttgtgaaaagtgcaatacacaggtgcat
ctgcacccacggcgtaagaaccatcgctacagcaagctctccctgcccaaagagctgcag
gaggggacctggaggcaggctaccttcccccgccagcagatggagctgtttgccgtgctc
tgcatcgagaccagccactacgtggccttcgtcaagtacggctccgcttcctcctcctgg
ctcttcttcgacagcatggctgatagagatggtgggcagaacggattcaacatcccacag
gtgtctccgtgtcccgaagtgggggcgtacctgaaaatgacccctgaggagctgcacgcc
ctcgatcccaaaaacatccagggttacgcacgccgactcctctgcgacgcctacatgtgc
atgtaccagagccccacaatgagcctgtacaaatag
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