Trichomycterus rosablanca: 134304012
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Entry
134304012 CDS
T09921
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134304012 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134304012 (cnot9)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134304012 (cnot9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
134304012
NCBI-ProteinID:
XP_062845603
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Position
27:6190359..6199063
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AA seq
297 aa
AA seq
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MLATGAAVSTALAQVDRDKIYQWINELSSPETRENALLELSKKRESVTDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SRAREALRQCLPDQLKDTTFALVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPSQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgacaggagcggcggtgagcacggcgctggctcaggtggatcgtgataaaatc
taccagtggatcaatgagctttcgagtccagaaacacgtgagaatgccctgctcgagctt
agtaagaagcgtgagtctgttactgacctggcacccatgctctggcattcatgtggcacc
attgcagctcttcttcaggaaatagtaaacatctacccctctattaatcctcccacactg
acggctcatcagtccaacagagtgtgtaatgccttagcactactacaatgtgtggcatca
catgtagagacacgctctgcttttttggcagcccacattcccctgttcctgtatccattt
cttcatactgtcagtaaaactagaccctttgagtaccttcgcctcaccagccttggagtc
ataggagccctggtgaagacagacgagcaggaggtgattaacttcctgttaacgacagag
atcatcccgctgtgtctgcgcatcatggagtcgggcagcgaactctctaaaacggttgct
acattcatcttgcagaagatcttgctggatgacacaggtctggcctacatctgccagacc
tacgagcggttctctcacgttgccatgatcctgggaaagatggttctccagctgtctaaa
gaaccatcagctcgactgttgaagcacgttgtgcgttgttatctgcgactctctgataac
tccagagcacgggaagccctgcgtcagtgtctgccagaccagctcaaagacacgaccttc
gctctggtgctgaaggatgacaccaccaccaagcgctggctggctcagctcgtcaaaaac
ctgcaggagggacaggtcacagacccgcgcggcatccctctgccgtcacaatag
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