Trichomycterus rosablanca: 134304061
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Entry
134304061 CDS
T09921
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134304061 (irx3a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134304061 (irx3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
134304061
NCBI-ProteinID:
XP_062845677
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All DBs
Position
27:14908688..14912217
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AA seq
425 aa
AA seq
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MSFPQLGYQYIRPIYQQERQGISSGRGGGELSPSGTLSNVLSTMYGSPFTAAHAYGAFLP
YSNDLSIFSQLGAQYELKDSPGVQHPAFAHPHPAFYSYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTDEE
GNVYGSDHEGEDGDKREDEEEIDLENIDTENIESKDELDEQDELHLDSKLDASCDSEVSD
GYEDLHEPEPKLFNKAASQEGRELHGDAHRDTDRPLHHHHLHHLHLGHSLELKTRAPGSE
QIKLNPVSNSPPAENNAAPAQKPKIWSLAETATSPDNPRKSPIVNGSAAQTVMPTHRLVS
CPVGKLQNWTSRAFSAHQLALLNSNHYIGLANQANGLALYSGSRHTEERSASSETAHTGT
SHPSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccaatacatccgaccgatataccagcaagagcggcag
gggatcagcagcgggcgcggcgggggcgagctgagtccgtccggtacgctctccaacgtc
ctgtccaccatgtacggatcacctttcaccgccgcacacgcctatggagctttccttcct
tattcaaacgacctgtctattttcagtcagttgggagctcagtatgaacttaaagacagt
cctggtgtccagcacccagcgtttgcccaccctcacccagcattttactcctacggtcag
taccagttcggagacccatccagaccgaaaaatgccaccagagagagtacgagcacccta
aaggcctggctgagtgagcaccgcaagaacccgtaccccaccaagggtgaaaagatcatg
ctggctatcatcacgaagatgaccctcactcaggtgtccacctggttcgccaacgcccgg
aggagactgaagaaggagaacaagatgacctgggcgccgcgcaaccgcacggacgaggag
ggcaacgtgtacggcagcgaccacgagggcgaggacggggacaagcgtgaggacgaggag
gagatcgacctggagaacatcgacacagagaacatcgagagcaaggacgagctggacgag
caggacgagctgcacttggactccaaactggacgctagctgcgactcggaagtctcggac
ggctatgaggatttacacgagcccgagccgaagctttttaataaagccgcgagtcaggag
ggcagagagttgcacggagacgcgcacagagacactgaccgacccttgcaccatcaccac
ctccatcacctccacctcggtcattcgttagaactgaaaacgagggcgcccggcagcgag
cagattaaactcaacccggtgtccaactccccccctgcggagaacaacgcagccccggcg
caaaaacctaagatttggtctttggctgagacagccacgagtccggacaatccccggaaa
tctccgatcgtgaacgggagcgcggcccagacagtcatgccaactcacagacttgtttcg
tgccctgtgggcaaactgcagaactggacgagccgcgcgttttcggctcaccagcttgcg
ctcctcaactcaaaccactatataggactggccaatcaggccaacgggcttgccctgtat
tccggcagcaggcacacagaggagcgcagtgccagctcagagactgcccacacaggtaca
tcacatccgtctcactga
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