Trichomycterus rosablanca: 134304065
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Entry
134304065 CDS
T09921
Symbol
rfx7a
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134304065 (rfx7a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Other basic domains
RF-X
134304065 (rfx7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Cytochrom_B562
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
134304065
NCBI-ProteinID:
XP_062845681
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All DBs
Position
27:complement(5470066..5492623)
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AA seq
1421 aa
AA seq
DB search
MADEQEQQAGQQHQSQICRSTTTGSGPSLGSSGLQGTETSALQLKIKNSICKSVQSKVDS
ILQDVDSFTDIEKLYLYLRLPSGPSTSTDKIEQSCVLSSRTQQMHAFSWIRNHLEEHPET
SLPKQEVYDEYKSYCDNLGYHALSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK
PFIHMPSLPNLDVHKPGDGCEGFESGSQNSGGEDEVRFAACDLVCEWAQKVLSRQFDSVE
DLARFLLNSHYISTKSVAALTVMTGSPTGPAMSAQSSAFVPTTDAHSFQPQVKTLASPSI
DAKQQLQRKIQKRQQEQKLYSPLPAEARIKRADGGATPSASAGMPCGSPALLSPQPTIGI
VVAAVPSPVTVQRSRQLMSPSPVAIATAENKVLPVNFQVVTQTVQPLNRCPKTPQNVPAS
PVSDRPARQRYAQILPKPATTSAITLRSPTALLITKSSIKTVMPTPTDGALNAVKTTPVS
LGPGNTALSTSNTARPASAGITRLTDDLRPVPRPRSGSVAAMPSTPSRPGTTAATAQDAS
EAGETQHQDDTTTQEGGGSNQVDGALKPRAASVPTPLSKGSAMQSGTRFNKKMLPDGFDA
ATQSFYQARPSKTTSSALVVTPRDAELTSTSPRKRECLYPDSSLTPVKKVFISEEGEGAK
LTMGDPVRNSPRTSVSIRPDSAPASVANKVKLSVPADVLASSECPVGSNAFQTVSRPQGV
SRGQWERPSSCLKTLPSCATAVNPARNTSFQSFSRPRSVSQGQWEGSSFGMQSKPIATRT
ASAPGQALLHPAMRVGLEEPNPFAAPELQEVLWDTEQPIPSQHGTLRNEPISTPLMDPLG
MAQVSVPDLVGNVSSQVQAGYFPFNDDDMTQDSIVEELVQMEEQMSRSMQGFSSCRNLPP
QSHQAALHNNNNVIPSHQARTSYHGSAHSSTPIHTTEMLGGGLGLPSDSPCLQFAPTTPV
DSALGSSCQTPIGTPHSNCSSGVPPSPVECRNPFAFTPINSSITSYHDGSIVSSSPVKPM
QRPMATHPDKAKLEWMNNSYNTTSSNSNTGISILPNYQNLVDDQFRKPHAFAIPGQTYQS
PVRPHDMHNRRLTPISPVQQQVASMANLNKQEGFAVPAPLDNKSGTFRCRSVSPAVRQCN
SSGTPNPNVPRYLTSPFNSPVTPEVLNIFANSQPDSSVTSMAQRSQSVPLNVMMQTEVLA
GGQSSSKKIAGFLLSKMDADGDGAVRGLGVNNTPSNYTARMNLSQILEAPTGPGFLTGAN
HRQVSPGPSAYRFIKPGYLSKNGAEQVAEERNQVSKEQQHQHQVFRGRPQQDLQHHQQPV
HFNSNVSGSDLFERQSLNAGSQDFPGEIHLTSELSGSINDLNSLDTNMLFDPSHQQGQYE
ESTLEELKDDPIFQQICSETANSAGFDWLENKDQATVEMLG
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagcaagagcaacaagcaggacagcaacaccagtcccagatctgcaggtcc
accaccacagggtctggaccttctctgggatcgagtggattacagggcactgaaacgagt
gctttacagctaaaaataaagaactcaatctgcaaatctgtgcagtctaaagtggacagc
attttgcaagatgtggacagttttacagacatcgaaaagctttacctctacctcaggttg
ccctctggccccagcaccagcaccgacaaaattgagcagagctgtgtcctctcaagccgc
acgcagcagatgcacgccttcagctggattaggaatcacttagaggagcaccccgaaaca
tctctgcccaaacaggaggtctatgatgagtataagagctactgtgacaatctgggctac
cacgctctgagcgctgccgatttcggaaagatcatgaagaacgtgtttcccaacatgaag
gcgcgccgactcggcacgagaggcaaatccaaatattgctatagtggcctgaggaagaag
ccatttattcatatgccctctcttccaaatctggatgtacacaaaccaggagatgggtgt
gaggggtttgagtccggtagccagaactccggtggggaggacgaggttcgctttgcggcg
tgtgacctggtgtgtgagtgggctcagaaggtgctgagtcgacagttcgacagcgtggag
gatctggcccgcttcttgcttaacagccactatatcagcaccaagtctgtagctgctctc
acagtgatgacaggatctccaacaggtcccgcgatgtcagcgcagtcgtccgccttcgtg
cccacgaccgacgcccactcgttccagcctcaggtaaaaacgctggcgtccccgtccatc
gacgccaagcagcagctgcaaagaaagatccagaagaggcagcaggaacagaaactttac
tccccgcttcctgctgaggcccggatcaaaagagcagacgggggcgcgactcctagtgcc
agcgcagggatgccgtgcgggagccccgccctgctttcgccgcagccgaccatcggtatt
gtggtggctgcggttccgagtcctgttacggttcagagaagcaggcagttgatgtcgcca
agcccagttgccatagcaacagcagaaaacaaggtccttccggtcaattttcaagtggtc
acacagacggtgcagcctttaaaccggtgtcccaaaaccccccagaacgtccccgcgagt
ccggtcagcgatcgccccgcccgccaaagatatgcccaaatcctgcccaaaccggccaca
accagtgcaatcacactacgctcacccactgcactcctgatcaccaaaagctccatcaaa
actgtcatgccaacgcccaccgacggtgccctcaacgctgtcaagacgacccccgtatct
ctgggacccggcaataccgctctgagcaccagcaacacagccaggcccgcctctgccgga
atcaccaggcttaccgatgaccttcggcctgtaccacggccccgcagtggatccgtcgct
gcaatgccgtccacaccgtccaggccgggaacgacagcagcgacagcacaggacgctagc
gaggctggagagacccaacaccaggatgacactactactcaggaaggtggagggagtaac
caggtagatggggcgctcaaacccagagcagctagtgtgcctacacctctgtctaaagga
tcggccatgcaatcagggaccagatttaacaagaagatgctccctgatggatttgacgca
gccacacaaagcttctaccaagccagacccagtaagaccaccagcagtgctcttgtcgtg
acacccagggacgcagaattgacctctacaagccctcgtaaaagagaatgcttatacccg
gattcaagtctgactcctgtcaagaaggttttcatttctgaggaaggcgagggtgcaaaa
ttaactatgggagacccagtgaggaacagtcccaggaccagcgtttccatccgaccggac
agtgcacctgcctcagttgcgaataaagtcaagctcagtgttcccgccgacgttcttgca
tcctcagagtgtccagttggcagcaatgccttccagacagtcagcaggccgcagggcgtc
tctcggggccaatgggaaagaccttcatcctgtctgaaaactcttccctcttgtgctaca
gctgtaaatcccgccaggaataccagcttccagagcttcagcaggccacgcagtgtttcc
caaggccaatgggaagggtcttccttcggtatgcaaagcaagccgatagccacccgtacc
gccagtgcgcccggtcaggccttgctccatccagccatgcgggtcggtctggaggagccg
aacccgttcgcagctccagaactgcaggaggtgctctgggataccgagcaaccgatccct
tctcagcacgggacactgagaaacgagcccatctcgacaccactcatggaccccctgggt
atggcacaagtttcggttccagacctggtgggaaacgtttcatcccaggttcaggcggga
tactttccatttaacgacgacgacatgactcaggacagtattgttgaagaactagttcag
atggaagagcagatgagccgttccatgcaagggttcagtagctgtaggaatttgccaccg
cagagtcaccaagccgccttgcacaacaacaacaacgttattccgagtcaccaggctcgg
acctcttatcacggttctgcccacagcagcacgcctatccacacgaccgagatgttagga
ggaggtctcggactgcccagcgacagtccttgtttacagtttgcccccaccaccccggtg
gacagtgctcttggaagcagctgccagacgcccatcgggacccctcactccaactgcagt
agtggcgtcccacccagtcctgttgagtgcagaaacccgttcgcgttcaccccgatcaac
tccagcatcacgagttaccatgacggcagcatcgtctcttccagtccggtcaagcccatg
caaaggccgatggccacccacccggacaaagctaagctggaatggatgaataacagctac
aacaccaccagcagcaattccaacactggaattagcattttgcccaactatcagaacctg
gtagacgaccagttcaggaagcctcacgccttcgccattcctggtcagacttaccaatca
ccggtcagaccccatgacatgcacaaccgccgtttgacacctatctctccggtccagcag
caggtagctagcatggctaacctcaataaacaggaaggatttgctgtcccggcgccactc
gataacaaatctggaaccttccgctgtcgcagcgtgagcccagcggtcaggcagtgcaac
tccagcgggaccccgaatcccaacgtcccgcgttatctgacctcgcctttcaactcaccg
gtgacacctgaagtgctaaatatctttgctaacagtcagccagactctagtgttaccagc
atggctcagaggagtcagtctgtccctctcaatgtgatgatgcagacagaggttctggcc
ggtggacagtccagcagcaaaaagatcgccggcttccttctcagcaagatggacgccgac
ggagacggcgcggtccgcggactcggtgtgaacaacacgccgtctaactacactgcccgg
atgaacctgtcgcagatcctggaggcgcctacgggtccgggtttcctaaccggtgctaac
caccgccaggtttctccaggcccgtcggcgtacagatttatcaagcccggatacctgtcc
aagaacggtgcagaacaggtcgcggaagagaggaatcaggtgtccaaggagcagcagcat
cagcatcaggtgtttcggggtcgtccgcagcaagaccttcagcatcaccagcaacctgtg
cattttaacagcaacgtcagcggtagcgacttgttcgagagacaaagtctaaacgcaggt
tcccaggacttccccggcgaaatacacctgacctctgaactctccgggagtataaacgac
ttgaacagtctggacacgaatatgttgttcgatccgagtcaccagcaaggccagtatgaa
gaatcaaccctggaggaactaaaggatgacccgatttttcaacagatctgcagcgagact
gcaaattctgccggattcgattggctggagaacaaggatcaggccacggttgaaatgtta
ggttaa
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