Trichomycterus rosablanca: 134304167
Help
Entry
134304167 CDS
T09921
Name
(RefSeq) WD repeat-containing protein 88-like
KO
K24757
WD repeat-containing protein 88
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134304167
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
134304167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF12
PQQ_2
Ge1_WD40
Cytochrom_D1
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
134304167
NCBI-ProteinID:
XP_062845817
LinkDB
All DBs
Position
27:complement(5526092..5532273)
Genome browser
AA seq
397 aa
AA seq
DB search
MLSEQEDPLALDEPIKEEKNRKEVSSLWGHEPHAQIAVKVLRGHADSVSSCHFCLHDTRL
LTGSHDKTAMFWDVETGAQLMVFKGHSDVITRCCLVPERNRVITSSWDMNLNAWDLETGK
LLWTVLQGGPLMSCSISGDGKYVASASDMENALYLNCADTGQRLHYIKDHHRSTVMSCRF
DPQTQHLASVSVDRSVRLWDLCSQKTTLTINSAHTNVISNCCFSCDGRYLCTASWDRTLK
LWDVQTGSFRSRGGVPLSKGHAGSVSSCTFSSDTSILVSGAYDRSVALWDLKGPFKTLML
KGHKDWVTDVDISADKNWVVSSSKDCTVRMYNIGQYEQLPGVIESRTDQQNECPIHTCDG
CGRLFSVSLLEDTDLITQCVFCRPTNVDRNLPAPPSI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtgaacaggaggatcctttggctctagatgagccgattaaagaggagaagaac
agaaaagaagtgtcttcattgtggggacatgagcctcatgcacagattgccgtgaaggtc
ttaagaggacatgctgactctgtctccagctgtcacttctgcttacacgacactcgactt
ctcactggctctcatgacaaaacggcaatgttttgggatgtggagacaggagctcagttg
atggtgtttaaaggacactcggatgtcatcactaggtgttgtttggtcccagagagaaac
agagtaattacatcctcctgggatatgaatttaaatgcctgggacctggaaactggcaaa
ttactgtggacagtattgcaaggtggtccgttgatgtcgtgcagcatttcaggggatgga
aagtatgtggcaagtgcttcagacatggaaaacgctctctatctcaactgtgctgacaca
ggacaaagattgcattatataaaagaccatcatagatccacagtgatgagctgccggttc
gatcctcaaactcagcacttggccagcgtatcagtggacagatccgttcgcttgtgggac
ctctgttctcagaaaaccactctgactattaacagtgcccacacaaacgtcatctccaac
tgctgcttcagctgcgatggtcgatacttgtgcacggcatcatgggaccgcactctgaag
ctgtgggacgtacagacaggttcattccgttccagaggaggagtgccactcagcaaaggc
cacgctggaagtgtcagctcttgcaccttctccagtgatacctcgattcttgtgtccggt
gcatacgacaggagtgtagcactgtgggatttgaaagggccgtttaaaaccctgatgctg
aagggccataaagactgggtgacagatgtggacattagtgctgataagaactgggtggta
tcttcctcaaaggactgtacagtgcggatgtataacattggtcagtatgagcagctacct
ggagtcatagagagcagaacagatcagcaaaatgaatgtccgatccatacgtgtgacgga
tgcggaaggttattttcagtctctctactggaggatactgacctaatcacacagtgtgtg
ttctgccgcccgacgaacgtggacagaaatctgccggcacctccttccatataa
DBGET
integrated database retrieval system
