Trichomycterus rosablanca: 134304190
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Entry
134304190 CDS
T09921
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134304190
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_9
ig
LRRNT
V-set
Ig_2
Syndecan
Motif
Other DBs
NCBI-GeneID:
134304190
NCBI-ProteinID:
XP_062845845
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Position
27:complement(13083360..13085395)
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AA seq
623 aa
AA seq
DB search
MTSYHQHQMMRGPRWKGVWFDPFFLLLLALQLLAVAGLVRAQSCPSVCSCSNQFSKVICT
RRGLREVPDGISTNTRYLNLQDNLIQVIKVDSFKHLHHLEILQLSKNHIRNIEIGAFNGL
TSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRLPSLRRLDLGELK
RLSYISDEAFEGLSNLRYLNMGMCNLKEVPNIKPLVRLDELEMSGNQLTMIQPGSFKGLV
YLQKLWMMHSQIQTIERNSFDDLQSLSDLNLAHNNLTYVPHDLFTPLRHLQRVHLHHNPW
NCNCDILWLSWWLRESVPTNTSCCARCNSPPSLKGRYIGELDQTYFQCYAPVIVEPPGDL
NVTEGIAVELKCRTNSLTSVSWLTPNGSVMTHGASLARVSVQNDGTLNFTSVMIQDTGNY
TCMVSNMLGNISASAVLNVSSMDNSGVTYFTTVTVETIESPIDGMSRAPEQPSFGWVASS
TTKGTPLSTEKAYTVPVTDIDDEGTLNGLEEVMKTTKIIIGCFVAITLMAAVMLIIFYKM
RKQHHQQDHNGPTRTIEIITVDDELTGVPAMESHLTLPSLEHEHYNHYNAFKSAYNHVSM
HSSVHEPLLIQASSKDNVQETQI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttaccatcagcaccagatgatgagaggtcctagatggaaaggggtttggttc
gacccttttttcctcttgctgttggctctgcagttgcttgcagtggcaggactggtacgg
gcccagtcatgcccctctgtatgttcctgcagcaaccagttcagcaaggtcatctgcacg
cgccgaggactgagggaggtgcctgatggcatctccaccaacacacgctacctgaacctt
caggacaatctcatacaggtcatcaaagtggacagctttaagcatctgcaccatttggaa
atcttacagcttagcaaaaatcacatccgcaacatagagatcggcgccttcaatgggctg
acgagtctcaacaccttggagctgtttgacaatcggcttacgaccatcccaaatggagct
ttcgaatatctctctaaacttaaagaactgtggcttaggaataacccgattgaaagcata
ccgtcttacgccttcaatcgtttaccctccttgagaaggctggacttaggggaactcaag
cgtctcagttacatttcagatgaagcgtttgagggcttgagcaacttgcgctacttaaac
atgggaatgtgtaacctcaaggaggtcccaaatattaagcccctggttcggctggacgag
ctcgagatgtcagggaaccagctgactatgatccagcccggttctttcaagggtctggtc
taccttcagaagctgtggatgatgcattcccagatccagacgatcgagagaaactctttc
gatgatttgcaatcgttaagtgatcttaacctggctcataacaacctcacctacgtgccc
catgatctttttacccctctgcggcatttgcagcgagtacacctgcaccataacccctgg
aattgcaactgtgacatactgtggttaagctggtggcttagagagtctgtcccgaccaac
accagctgctgcgcccgctgtaactctcctccgagcctcaaggggcgctatatcggcgaa
ctggaccagacctactttcagtgttatgctcctgttattgtcgagccgcctggggatctt
aatgtgaccgagggaatagcagtggagctcaaatgtcggacaaattcgctgacctcggtc
agttggctaacaccaaatggctccgtcatgacacacggggcatcgctggcacgtgtctct
gtacaaaacgatggaacgttaaattttactagcgttatgattcaggataccggaaactac
acttgcatggtcagcaacatgctgggcaatatttcggcctctgccgtgctcaacgtgagc
tccatggacaacagcggtgtcacctactttaccacagtcactgttgagactatcgagtcc
ccgattgatgggatgagtcgagccccagagcagccttccttcggctgggtggcgtcttct
accacgaaaggaacccccctttcgaccgagaaagcctacaccgttcctgtgacggatata
gacgacgagggcactctcaacggcctggaggaggtcatgaagaccaccaagatcatcatt
ggctgcttcgtggccatcacgctcatggccgccgtcatgctgatcatcttctacaagatg
agaaagcagcatcaccagcaggatcacaacgggccgacccgcacgatcgagatcatcacc
gtggacgacgagctgacgggggttccagcgatggagagccacctcaccctcccttcgctg
gagcacgagcactacaaccactacaacgctttcaaaagcgcctacaaccacgtctcaatg
cacagctccgtgcatgaacctttactaatccaggccagctcgaaagacaacgtgcaagag
acacaaatttaa
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