Trichomycterus rosablanca: 134304257
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Entry
134304257 CDS
T09921
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134304257 (irx5a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134304257 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
134304257
NCBI-ProteinID:
XP_062845919
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Position
27:complement(14747874..14752279)
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AA seq
440 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSLISGPRTEELGRSSSGSAFAPYAGSTAFSGASAA
YSSHLPYGADAAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPSKPMEKGDSTDTETDPKILHTAEAQCDRFQEDPHVKD
SDPLLSDSDFKEVEEEPPKATTSSPPLIQRPLELSAHDRGQEVAHPAGAVNHSNATSVIH
PPASVTKPKLWSLAEIATSSDRCRGSGSSEAAAGAAPSTAASPSRTTTQCALPSGALISR
PLYYTSPFYAGYTNYGSFSHLHGTHGTVSSPASTTHFNGINASVLNRAEALARESKARSQ
AQVDLCKDSPYELKKGMSNI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtaccaaccgtccgcctcgctggcactctactcgtgt
cccgcgtacagcacgagtttgatctcggggccgcgcaccgaggagctgggcaggtcgtcg
tcgggctcggcttttgcgccctacgccggatctactgcgttcagcggagcctcggctgcc
tacagctcgcatctgccgtacggagccgacgccgccgcggccgcggccactttcacttca
tacgtgagttcgccctatgaccacacgacgggcatggcgggttcaatcggctaccacccg
tacgcggctccgctgggttcttacccgtacggtgacccagcctaccgtaaaaacgcgacc
cgggacgccacggctactttaaaggcctggctcagcgagcaccgcaagaacccctacccc
accaagggggagaagattatgttggccatcattacaaaaatgaccctgacccaagtgtcc
acctggttcgccaacgcccggaggagactgaagaaggagaacaagatgacctggacgccg
cgcaacaggagcgaggacgaggaggaggacgagaacatcgacctggaaaagaacgacgac
gacgagcctagcaagcccatggagaaaggggactcgacagatacagagacagatcccaaa
atccttcacacagccgaagcccagtgcgacagattccaagaggacccccacgtcaaggac
tcggaccctttgctcagtgactcggactttaaggaggtggaggaggagccccccaaagcc
accacgtcgtccccgccgctaattcagcggcctctggagctcagcgcgcacgaccggggg
caggaagtggcgcaccccgccggtgcggtcaatcacagcaacgccacgtccgttatccac
cctcccgcgtccgtgaccaagcctaaactgtggtccctggcggaaatagccacgtcgtcg
gacaggtgcagggggagcgggagcagcgaggcggcggcgggagcggcccccagcacggca
gcgtcgcccagccggaccacgacgcagtgcgcgctccctagcggcgctctcatctcccgg
cccctgtactacacgtccccgttttacgcgggctacacgaactacggctctttcagccac
ctgcacggcacccacggtaccgtctccagccccgccagcaccacgcacttcaacggaatt
aacgcgagtgttttgaaccgggccgaggccctggcgcgggagagcaaagcccggagccag
gcgcaggtagacctttgcaaagactccccatatgaactcaagaaaggtatgtccaacatt
taa
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