Trichomycterus rosablanca: 134304773
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Entry
134304773 CDS
T09921
Symbol
acsl1b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00061
Fatty acid biosynthesis
trn00071
Fatty acid degradation
trn01100
Metabolic pathways
trn01212
Fatty acid metabolism
trn03320
PPAR signaling pathway
trn04146
Peroxisome
trn04216
Ferroptosis
trn04920
Adipocytokine signaling pathway
Module
trn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
134304773 (acsl1b)
00071 Fatty acid degradation
134304773 (acsl1b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134304773 (acsl1b)
09143 Cell growth and death
04216 Ferroptosis
134304773 (acsl1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134304773 (acsl1b)
03320 PPAR signaling pathway
134304773 (acsl1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
trn01004
]
134304773 (acsl1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134304773 (acsl1b)
Enzymes [BR:
trn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
134304773 (acsl1b)
Lipid biosynthesis proteins [BR:
trn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
134304773 (acsl1b)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of breast milk
134304773 (acsl1b)
Exosomal proteins of breast cancer cells
134304773 (acsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
134304773
NCBI-ProteinID:
XP_062846127
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All DBs
Position
1:20123297..20162171
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AA seq
697 aa
AA seq
DB search
MQAQELLKHLRVPELTEVRDYIRNLSTGTLVGVGAFAALTTFWYTTRPKALKPPCDLRMQ
SVEVPGGELARRSVLVDADKLLSFYYDDATTMYEAFTRGLRESNNGPCLGFRKPKQPYEW
LSYSEVAERAENLGSFLLHKGHSKDKDQFIGIFSQNRPEWTISELACYTYSLVSAPLYDT
LGNEAIDYIINKTDTSTVVCDVAEKASLLLDSVEGKPHTLKTLILMEEFDSELVARGQKC
NIEIISLKDAEALGKAHRQQPTPPKSDDLAIICFTSGTTGNPKGAMLTHRNILSNVSAFI
KITETSCPLTSSDSHISYLPLAHMFERVVQGVMLIHGGRIGYFQGDIRVLMNDLTALRPT
VFPVVPRLLNRMFDKIFGQANTPLKKWILGYAFKRKEAEMMSGIIRRNSIWDKLIFKKVQ
ASVGGNVRLMLTGAAPVSAHVLSFLRAALGCQFYEGYGQTECTAGCAVTLTGDWTGGHVG
PPLPCNLIKLVDVAEMNYLAVNGEGEVCVKGPSVFKGYLKDPEKTEEAIDKDGWLHTGDI
GRWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYIHSEAVVQAFVHGDSLQACLVAII
VPDPDFLPVWANKKGFHGSYEELCSNKDVKNAILEDIVKLGKESGLKSFEQVKDIALHAE
MFSIQNGLLTPTLKAKRTELRNHFRQQIDQLYSTIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggagctgttgaagcacctgcgcgtgcctgagctgactgaagtaagggat
tacatccgcaacctgtccactggcactctggtgggcgtgggggcctttgcagcccttacc
accttctggtacaccacacggcccaaagccctcaaaccaccatgcgacctgcgcatgcag
tccgtcgaggtgccgggaggagagttggcgcgacgttcagtgctagtggatgctgacaag
cttttgtcattttactatgacgatgctacgacgatgtacgaggccttcacgaggggcctg
cgggaatcaaataatgggccttgcctcgggttcagaaagccaaagcagccttatgaatgg
ctgtcctattcagaggttgcagagagagctgagaacctgggctccttcctgctgcacaaa
ggccactccaaagacaaagaccagttcattggcatcttctctcagaacagacccgagtgg
actatctcagagttggcttgctacacatactcgctggtatcggcgcctctttatgacaca
ctgggaaacgaagccattgattacatcattaataaaaccgatacctccacagtggtgtgt
gatgtggcagagaaggcctctttgctgctggactctgtagagggcaaaccgcacacactg
aaaacactgattctgatggaagagtttgactctgagttggtggctcgagggcagaagtgc
aacatagagattatcagtctcaaggatgcagaggctcttggtaaagcacacagacagcag
ccgacacctcctaaatcggatgacttggctattatttgctttaccagtggaacgacagga
aacccgaagggggcgatgctcacccacagaaacattttgtccaacgtctcagcctttatc
aagattacagagaccagctgtcctctcacttccagtgactcacacatctcataccttcct
ctagcacacatgtttgagcgagtggtacagggtgtgatgctgattcacgggggtcgtatt
ggttattttcaaggcgatatccgtgtgctgatgaacgatcttacagctctgcggcctact
gtcttcccagtcgtgccccgtttgctcaacagaatgtttgataagatctttgggcaggct
aacactcctttaaagaagtggattctgggatatgccttcaagaggaaggaggctgagatg
atgagtggaatcatcaggcgaaacagtatatgggacaaactcatttttaagaaagtccag
gccagtgttggaggtaacgtgcgcttgatgctcaccggtgctgctccagtctctgctcat
gtactctccttcctacgtgctgctctgggctgccagttttatgaaggttatggacaaacc
gagtgcacagctggctgcgcggtcacgctgacaggagactggacaggaggccacgttgga
cctcctctgccctgcaacttgatcaagctagtggacgttgctgagatgaattacctagct
gtcaatggagagggagaggtgtgtgtaaaggggcccagtgtgttcaaaggataccttaaa
gacccagagaagaccgaggaggccattgataaggatggctggcttcacacaggagacatt
ggaagatggcttccgaacggcacactgaagattgtggaccgtaaaaagcacatctttaag
ttggcacagggagaatacatcgccccggaaaagatcgaaaacatttacatccatagtgaa
gctgttgttcaggcctttgtgcatggagacagcctacaggcctgtttggtagcgatcatt
gttcctgacccagacttcctgcctgtttgggccaataagaaaggatttcacggctcttat
gaggagctctgcagcaacaaggatgtgaaaaatgccattttggaggacatcgttaaattg
ggcaaagaaagtggactgaagtcctttgaacaagtgaaagacatcgccctgcacgcagag
atgttctccatccaaaacggccttctcaccccaaccctcaaagccaaacgcactgagctc
aggaaccatttcagacagcagatcgaccagctctattccaccatcaagatgtaa
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