Trichomycterus rosablanca: 134304903
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Entry
134304903 CDS
T09921
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134304903 (rnf115b)
04121 Ubiquitin system [BR:
trn04121
]
134304903 (rnf115b)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134304903 (rnf115b)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134304903 (rnf115b)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134304903 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
HypA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
134304903
NCBI-ProteinID:
XP_062846141
LinkDB
All DBs
Position
2:complement(9515101..9531376)
Genome browser
AA seq
306 aa
AA seq
DB search
MKMAEAAEIRLNRYFCHCCKAKVEPKLPDLVCPSCESDFIEEVTENSSLLQIEDTASDEV
LASDGMASHFAELWQLLFLERSALLSNPIASNSKSLTSSSTLPTALSDPPPDALRSRVSP
GDCSESSNVQRIPSQPDLQTHPETDQGPAVEGIVQEFLTGLFSNSGSARSQLSSWSGMLH
SNPGDYAWGQGGYDAVITQLLGQLENAGPPPAEKEMISSLPTIHVSSEQTARRLECPVCR
EEYSPGELVRQLPCLHCFHTDCIVPWLQLHDTCPVCRKNLHGEDVKLLNQTPAEEAGSVT
RETSKT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggaggcggctgagattcggctaaaccgttatttctgtcactgctgtaaa
gctaaagtggagcccaaactgccggatttggtttgtcccagctgtgagtctgattttatt
gaggaggtaacagaaaactccagtcttctacagattgaggacactgcaagtgacgaggtg
ttggccagtgatggcatggcttctcactttgctgagttatggcagctgctcttcctggaa
cgttccgccctgctctccaaccccatcgcctccaactccaaatctctcaccagcagctct
actcttcccacggcgctttctgatcctccaccagatgcattacggtctagagtttctcca
ggagattgttcggagtcctcaaatgttcagaggattccttcacagcccgatctacagaca
cacccagagacagaccaaggaccagcggtggaggggatcgtccaggagttcttgactggc
ctattctccaactctggtagtgcgagatcccagctgtcatcatggtctggaatgttgcac
tcaaacccgggagattatgcctggggacagggagggtacgatgcagtcatcacacagttg
ctgggtcagttggagaatgctggtcccccacctgctgagaaagaaatgatctcatccctt
cctaccatccacgtctcctcagagcaaaccgcaaggcgtttggaatgccctgtgtgcagg
gaggagtactcaccaggggaattggtccgacagctgccctgtctgcactgttttcacact
gactgcatagtgccttggttacagctgcatgatacttgtcctgtgtgtcggaaaaatcta
catggcgaagatgtcaaacttctaaaccagactccagctgaagaggccggctctgtcacc
agagaaacctccaaaacttag
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