Trichomycterus rosablanca: 134304936
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Entry
134304936 CDS
T09921
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134304936 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134304936 (snx27a)
Membrane trafficking [BR:
trn04131
]
Protein recycling
Others
Others
134304936 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134304936 (snx27a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
PDZ_2
USP7_C2
SNX17-31_F2_FERM
DarA_N
RA_3
Motif
Other DBs
NCBI-GeneID:
134304936
NCBI-ProteinID:
XP_062846144
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Position
2:complement(10086785..10123706)
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AA seq
559 aa
AA seq
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MADLERNESLGSPHSPVTVPTPSRNGSGIQTVTTGPRIVRIIKSESGYGFNVRGQVSEGG
QLRSINGELYAPLQHVSAVLPGGAAEQAGIVKGDRILAVNGVNVEGATHKQVVDLIRTSE
KELVLAVLSVPPQEADGLDSGEDGSAPPNYDYSEKQAVPISVPTYKHVEQHGERFVVYNV
YMSGRQLCSKRYREFAILQQNLKREFATHSFPKLPGKWPFSLSEQQLDARRRGLEEYLER
VCSVRVIGESDIMQEFLSESDENYNGVTDVELRIAMPDKTTISVRVRKNSTTDQVYQALV
MKVGMDSVMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFSTD
EQELLRENPLALHYCFHQAQDDIKKGFIKAEDKSYQLQKLAEQRKMASYLNLLRSCEGYN
EVAFPHCSCDSRRKGHVIAAISIHHFKLHACTEDGALENQVIAFEWSEMQRWDTDEEGMA
FCFEYVRGEKKPRWVKIFTPYFNYMHECFERIFCELKWRTEVEEGISDKDNKNCSSNDYL
SPLEQQKGWRHLGNEIETS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttggaacgtaacgagtctctgggctctcctcattctccggtaacggttcct
acgccgtctcgaaacggctccgggattcagacagtcacgacgggaccgcgcatcgtccga
attatcaagtcggagtcgggctacgggtttaatgtgcgcggtcaggttagtgaaggcggc
cagctacgcagcattaacggggagctgtacgctcctctgcagcacgtcagcgcggtgtta
ccgggaggagcagctgagcaggccgggatagtgaaaggagaccgaattctagccgtgaat
ggcgtgaacgtagagggggctacccataagcaggtggtggatctgatccgaacgagcgag
aaggagctggtcctggccgtcctgtcggtgcccccgcaggaagccgacggcctcgactcc
ggagaggatggctcagctccacctaattatgactacagtgaaaagcaggctgtgcccatc
tctgtccctacgtacaagcacgtggagcagcatggtgaaagatttgtggtgtataacgtc
tacatgtctggcagacagctctgctcaaagcgctacagggaatttgctatcctacagcag
aacctaaaaagagagtttgccacccactcattccctaagctaccaggaaaatggcccttc
tccttgtccgagcagcagctggatgcccgcaggagaggactggaggaatacctggagaga
gtgtgctcagtgagggtcatcggggaaagtgacatcatgcaagagtttctgtccgagtca
gatgagaactataatggtgtaacagatgtggaattacgaatagcaatgccagacaagaca
accatttcagtcagggtgcgcaagaacagcaccaccgaccaagtgtaccaggctctagtg
atgaaggtcggcatggacagtgtaatggccagttactttgccctctttgaggtgatcaac
cactctttcgttcgtaagttggcccccaatgaattcccacacaagctatacgttcaaaat
tacacttcagcagtaccggggacctgcctgactctgcgcaagtggctctttagcacagat
gagcaagagctgctccgggaaaacccactggctctgcactactgcttccaccaggcacaa
gatgacataaagaaggggttcatcaaagcagaggataagtcctaccagcttcagaagctt
gccgagcaaagaaagatggcctcatacttaaatttgctgcgctcatgtgaggggtataac
gaggtcgcgtttccccattgctcatgcgattcgcggagaaaaggtcacgtgattgccgcc
atcagcattcatcacttcaaactgcacgcttgcacggaggacggcgcgctagagaatcag
gttatagctttcgaatggtccgagatgcagaggtgggacacagacgaggagggaatggct
ttctgcttcgaatacgtacgaggggagaagaaaccccgctgggtcaaaatcttcactcct
tattttaactacatgcatgaatgctttgagaggattttctgtgagctcaaatggaggaca
gaggtggaagagggcatatcggacaaggacaacaagaactgcagtagcaacgattatctc
tctccattggaacaacagaagggatggcgccacctagggaacgaaattgaaacctcctaa
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