Trichomycterus rosablanca: 134305452
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Entry
134305452 CDS
T09921
Name
(RefSeq) m7GpppX diphosphatase-like
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134305452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134305452
Enzymes [BR:
trn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
134305452
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134305452
3'-5' decay
Other 3'-5' decay factors
134305452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
HIT
CEP170_C
Motif
Other DBs
NCBI-GeneID:
134305452
NCBI-ProteinID:
XP_062846227
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MQVDTSRLNKRIGIKTTVICPATEKHVKKYLRQETFLINETEDDYRSITLPHITQQSFSV
QWVYNILEKKAEADRIVFEDPDPHVGFVLLPDFKWDQKQLDDLYLIAIVHRRDLKSLRDL
TPDNLPLLRNILEKGVEAIGKKYNVPSSKLRMYLHYQPSYYHIHVHFTSLDYEAPGCGVE
RAHLLTDVIQNLQVQPEYYQKRTLTFPIRADDALLTKFREAGKI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgacacgtcacgacttaacaagcggataggaatcaaaaccactgtgatctgc
ccagcaacagagaagcatgtgaagaaatacctgcgccaggagaccttcctcatcaacgaa
actgaggatgattatcgttccatcactcttcctcacataacccaacaaagcttcagtgtg
cagtgggtttacaacattctggaaaagaaagctgaagctgacaggattgtgtttgaagat
ccagaccctcatgtcggctttgtcctcctgccagattttaaatgggaccagaagcagctg
gatgatttatatctgattgccattgtacatcggcgggacctgaagagtttaagagatctt
actccagacaatcttcctttattaagaaacatccttgaaaagggggtggaagccattggg
aagaagtacaatgttccctcgtctaagctgcggatgtacctgcactaccagccgtcctac
taccacatccatgtgcacttcacctctctagattatgaagctccaggatgtggagtagag
agagcacatctgcttacagatgttatacagaacctgcaggtccaacctgagtattaccaa
aaacgcaccctcaccttccccatacgggcagatgatgcactgctgaccaagttcagagaa
gcaggaaagatttag
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