Trichomycterus rosablanca: 134307074
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Entry
134307074 CDS
T09921
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03440
Homologous recombination
trn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134307074 (top3a)
03460 Fanconi anemia pathway
134307074 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134307074 (top3a)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134307074 (top3a)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
134307074 (top3a)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Topoisomerases
134307074 (top3a)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
134307074 (top3a)
FA (Fanconi anemia) pathway
134307074 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
134307074
NCBI-ProteinID:
XP_062846498
LinkDB
All DBs
Position
2:23346010..23360434
Genome browser
AA seq
1010 aa
AA seq
DB search
MTIIARSLFRLTAQIGFCRHISFSMIRRTQIKKVLCVAEKNDAAKGISEIMSNGRARRRE
GYSVYNKIYEYEYNLFGQNVTVAMTSVSGHLLGLEFKAPFQKWHSCNPVLLFDAEVEKYC
PENFVQIKRTLEREARQCQALVIWTDCDREGENIGFEIIDVCKAVKSNIQVFRARFSEIT
PNSIRRACESLTEPDINVSDAVDVRQELDLRIAFTRFQTLRLQKIFPASLADQLISYGSC
QFPTLGFVVERFKAIQAFIPETFFKIKVVHEPNEEESVEFGWKRHRLFSHTACLVLYQMC
MEDPMAKVISVTSKPKSKWRPLPLDTVELEKLASRKLKISAKETMRIAEKLYTQGFISYP
RTETNMFPKTLNLVPLVEQQTQDNEWGAFAQGILESGGPTPRNGTKSDQAHPPIHPTKYT
NGLQGNERRLYEFIVRHFLACCSKDAQGQEVTIEIDIAEERFSASGLTIIARNYLEVYPY
DKWYNKVVPLYTPETTFQPTAIEMVEGHTSPPQLLTEADLISLMEKHGIGTDATHAEHIE
TIKSRMYVGLTEDQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDKT
SVLRHHVAKYKAVFIESVKKAKKLDEALSNYLGQAQEYTEQVEQELEMPLPVRKCPQCNR
DMVLKTRKDGTGKFLSCMGYPSCKAAVWFPDTVLEVSRADSVCPTCQPHPVHMLSLKFKR
GSLPPGMSVEFVGCIGGCDETLREVLNLKYLRGGGDSGTRANQNAAPRQPNPPRTNSAPQ
SRTESRSVPPRARAESNRPAQVKATTPAWSMQPPPTAQNNVVCNCGQDALLLTVRKEGPN
QGRVFYKCNTGNCNFFLWADQPNDQPGPAGSRGPVGPVGHGSQPPRASLGFGNTPQQRPA
NRGSGGGGDENMCNCNEPAVTRTVMKDGPNKGRMFLTCAKPRDQQCGFFQWMDENVAPAA
VGSTGGNSSKWGGNKKNGSSSSKAPTARKPRTCGICHQPGHTRTTCPQGQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaccattattgcaagatcattgtttcgattgacagctcagattggattttgtaggcac
atttccttcagcatgatcagaagaacccagattaagaaggtgctttgtgttgctgagaaa
aacgatgcagccaaaggtatttcagagatcatgtctaatggaagagcaagaaggagagag
gggtactcagtctacaacaagatctatgagtatgaatataatctatttggacagaatgtc
actgtggccatgacatctgtgtcaggacatcttttaggcttggaattcaaagctccattt
caaaaatggcacagctgtaatccagttttgttgtttgatgcagaggtagaaaagtattgc
cctgagaactttgttcagattaagagaaccttggagagagaggcaagacagtgtcaagct
ctggtcatctggactgattgtgatcgtgagggagagaacataggatttgagatcattgac
gtctgcaaagctgttaagtcaaacattcaggtgtttcgtgctcgattttctgagataacc
cctaactccataagaagagcctgcgagtctctaactgagccagatatcaatgtcagtgat
gcagtggatgtcaggcaagagcttgatctccgcattgcatttacaaggttccagacttta
cggttacaaaagatctttccagcgtctttggctgatcagctcatcagttatgggagctgc
cagtttcctacacttggctttgtggtggaaaggtttaaagcaatccaggcttttattcct
gagaccttctttaaaataaaagtggtacatgaacctaatgaggaggaatcggtagaattt
ggctggaaaaggcatcggctgttcagtcacactgcatgtcttgtgctgtatcaaatgtgc
atggaggatcccatggcaaaagttatttctgtaacaagcaaacctaaaagcaaatggcga
ccattacctctcgacactgtggaacttgaaaaactggcctcaaggaaattgaagataagt
gcaaaagagactatgagaatagctgaaaagctatacacacaagggtttatcagttatcct
cgtactgagaccaacatgtttcccaaaaccctgaatttggttccacttgttgagcagcag
actcaggacaatgaatggggggcttttgctcaaggcattttagaaagtggtgggcccaca
cctcgaaatggaacaaaatcagaccaggcccatcctcccattcatcctactaaatacact
aatggtctgcagggaaacgagagacggttgtatgagtttatagttcgtcactttctggct
tgctgctccaaggatgcacagggtcaagaggtaactatagaaattgatattgctgaggag
agattttctgcaagtgggctgacgatcattgctaggaactacctggaggtttacccatac
gacaagtggtacaataaggttgttccattatatacaccagaaacaacatttcagccaact
gcaatagagatggtcgaaggacatacaagcccacctcaacttcttacagaggctgacttg
atttctcttatggagaagcatggcattggcactgatgccacacatgctgaacacattgag
accatcaagagccgcatgtatgtgggcctgacagaagatcagaggttccttcctggagag
cttggaatgggtcttgtcgaagggtacaactccatgggctatgaaatgtctaaaccagac
ctaagggcagagttggaggcagacctgaagctggtgtctgagggaaggaaggacaagacg
tctgtcctcagacatcacgttgcaaaatataaagcagtttttatagagtctgtcaagaaa
gctaagaaattggatgaggctctgtctaactatttaggccaggcccaagaatatactgag
caggtagaacaagaactagagatgccattaccagtacgaaagtgtcctcagtgcaaccga
gacatggttttaaagactaggaaggacggcacagggaagtttctgtcatgtatgggctac
ccgtcatgtaaagcagcagtgtggtttccagatacagtactagaggtcagcagagctgac
agcgtctgtccaacttgtcagccacatcctgttcacatgctaagtttaaagtttaagagg
ggaagtctgcctcccggaatgtctgttgagtttgtcggatgcatcggaggctgtgatgag
acactgagagaagtcttaaatttaaagtatcttcgtggaggaggcgattcaggcactcgg
gctaatcagaacgcagctcctcgtcagccaaatcctccaagaactaattcagcacctcag
tctagaactgagagcagatctgtacctcccagagccagagctgagagcaacaggccagcc
caggttaaagccacaacaccggcctggtccatgcaaccaccacccactgctcagaataac
gttgtgtgtaactgtgggcaggatgcacttctcctcacagtccgtaaagaaggtcccaac
caaggccgtgtattctacaaatgcaatactgggaactgtaacttctttctgtgggcggat
cagccgaatgatcagcctggtcctgcagggagcagaggacctgttggacctgttggccac
ggctctcaacctcccagggcttcacttggttttggaaatactcctcaacaaaggccagca
aacaggggatcagggggaggtggagatgagaatatgtgtaactgtaatgaacctgcagta
acaaggaccgttatgaaagatggaccaaacaaaggcaggatgttccttacctgtgctaaa
ccacgggatcagcagtgtggcttctttcagtggatggatgagaatgttgctccagctgct
gtggggagcacaggaggaaacagcagtaaatggggtggtaataagaagaatggaagctca
tctagtaaagctcccactgctagaaagccgagaacttgtggaatttgccatcagccgggc
cacacacgaaccacctgtcctcagggccagtga
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