Trichomycterus rosablanca: 134307241
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Entry
134307241 CDS
T09921
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134307241 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
trn03029
]
134307241 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
trn04031
]
134307241 (rhot1a)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
134307241 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
134307241 (rhot1a)
GTP-binding proteins [BR:
trn04031
]
Small (monomeric) G-proteins
Rho Family
Miro
134307241 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
EF-hand_8
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
134307241
NCBI-ProteinID:
XP_062846515
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All DBs
Position
2:24813795..24840598
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AA seq
619 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKALTRIFKISDLDNDGILNDNELNFFQRTCFNMPLAPQALEDVKNVVRRNMTDG
VRDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLLKIPPNCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYMDVQRCLEYLGYLGYSIIHEQDSQAAAITVTRNKHIDLQKKQTQRSVFR
CNVLGARGSGKSGFLQAFLGRNLSRQKRIREDHKSFYAISTTYVYGQEKYLLLHEIHPDC
EFLSEADLACDVICLIYDVSNPRSFEYCAKSYKKYFMDSKTPCMIIAAKSDLHEIRQLYS
STPLDFCRRHKLHPPQLFTCNTAEAPSKDIYTKLTTMAMYPHMTQADLKNSTFWLRASVG
ATVCAVLGFAMYKALLKHR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatattacttgttggggaacctaaagtggggaagacgtcactg
atcatgtcacttgtcagtgaagaattcccagatgaggttcctcttcgtgctgaggaaatc
accattccagctgatgtcactcctgagagagtacctacacatatagtggactattcagaa
gcagaacagtcagatgagcagctgtaccaagaaatatccaaggcaaatgtcatatgcatt
gtctactctgtaaacaacaaaaaatcaatagagaaggtcacaagccactggattcctcta
ataaacgacagaacagacaaggacagcagggtgccactgattcttgttgggaacaaatca
gacctggtggaacacagcagcatggagacaatactccccatcatgaaccaatactcagaa
attgagacctgtgttgagtgttctgcaaaaaatctgaagaatatttcagagttgttttac
tatgcccagaaggctgttctgcaccctacagggcccctctactgcccagaagagaaagag
atgaaaccgtcttgcatcaaagcacttacgcgaatcttcaaaatatctgacctggacaat
gatggcattctcaatgacaatgaacttaatttctttcagaggacctgttttaacatgccc
ctggctcctcaagctctggaggatgtaaaaaatgttgtgcggcggaacatgacggatggg
gtcagggacaacgggctcactcttaaaggcttcttgtttctgcacacactctttatccag
cgagggaggcatgaaaccacatggactgtgctccgaaggtttggctatgatgacgacttg
gagctaacccaggaatacctgtttccactgctaaaaatccctcctaactgcacaacagaa
ctgaaccacaatgcttatctctttctgcagagtgtctttgacaaacacgacaaggatcgg
gactgtgccttgtctcctgatgagctcaaagatctgtttaaagtcttcccctacatgccc
tggggtcctgatgtcaacaacacagtctgcaccaatgaacagggctggatcacctaccag
ggctacctgtcccagtggacgctaacaacatacatggatgtgcagcgctgcttggagtac
ctgggttaccttggttactcaatcattcatgagcaagactcacaggctgctgccattaca
gtcaccaggaacaagcacattgacctgcaaaagaaacagacccagcgcagcgttttccgc
tgcaacgtcctgggagcgcgaggcagtggcaagagtggctttctgcaagcctttctgggc
agaaacctttctcgacagaaaaggattagggaagaccacaaatccttctatgcaattagc
actacatatgtctatgggcaggagaagtacttgctgctgcacgagattcacccagattgt
gagtttctctcagaagctgacctggcctgtgatgtcatctgtctgatatatgatgtcagt
aaccctcgctcttttgagtactgcgcaaagtcctataagaaatactttatggacagcaag
acaccgtgtatgatcattgctgccaagtcagacctgcacgagattcgtcagctctacagc
tcaactcctttggacttctgtagaagacacaagctgcacccaccacagctctttacctgc
aacacagccgaggcacccagcaaagatatctacaccaagctaaccaccatggccatgtat
ccgcatatgacccaagcagacctgaagaactcgaccttctggctgcgagccagcgtcggg
gccactgtctgcgcagtgttgggctttgccatgtataaagcacttctcaagcatcggtga
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