Trichomycterus rosablanca: 134307487
Help
Entry
134307487 CDS
T09921
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134307487
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
134307487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_N
AP5B1_C
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
134307487
NCBI-ProteinID:
XP_062846546
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MTSWGPKISSFLSSPSQFLSCTTAESFLAELLDELRDDKASDNKKILLLSVLLEHPGVLC
PTTSAGEGTAQELISILTYTPQKSVTLKCHLMLAITNVLICTTCLASQAKVAEDFLNFLF
RNIQDTNDNSGGLCVHALRATACECLREMENCQPGLLSQKLEALYYLKNQETTVLHQSYS
LLYSLGLKNAIHLLAKQKNVDNAKLRGVLSGNEGFVWKAIDLPLSVLPFGMISQVPQLPT
TLDCKDLRSIMSLLLEESYLMTPASQVALLRGLVEIVAMVPAITPAVFKSQLLRLFGTTE
VELMHATLIMKGTFTDSLFTAEDENFLLKRLTGMAQHPLLKTPEKLFYMDCILHFPENRP
ISSSGEESLPVLVTPQLTLSLFPTVFDDSTTMLCRLNLLCLVLLEADEDEESKGLSYLFD
HLMALLKIVNNQGSRDMITMFFRATFIFLMHFNHIKKFSKKLVSKLCELYSKNCHLAPNM
INLADKVQECFEDSIWSVRLLTALQKCIVEMPPLQLTLQNLSWHLKILARVALESQIAQR
NTIHFLLNILINSNLCERRSWQVGTAILTVCRNLLQHPTLNEVFIELADLLQHMLKHYED
SDIQDHARFYYTLLTNLSWEKLAGVLAKAPEGGQMKVRSMSAIVAESDGLTSCLTVQKPE
GCVLQLTKIDKTDSQGVGPITESQEALGQRDLFEVYQDQFKSPGFASEVTLCYNLTHASV
KDVGFDRIYTICLHFDLNTSHYAEVKDIHVPCLFRDRKPPQVNLTLRPHHPYPTSLRVSA
LFTTEDGLSWNTQLPDVEVSFPEIFLPMPLPQGTSPESKEEVFDKIWKNISSGEPSSSET
SLYCFKTDRDTLANLIEEYFKGYLVAQTKDQVCKVLFYLPPFFHVLLMISEAEDAVQLRI
ATENSELLPHINSYLQSITGNSSLTNARK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctgggggccaaaaatatcctcatttttatcaagtccatcacagtttttgtct
tgcaccacagctgagagttttttagctgaacttctggatgaattaagagatgacaaagcc
agtgacaacaaaaagatactcctcttgtcagtattattggagcatccgggagttctttgc
ccaaccacgtcggcaggagaggggacagcacaggagctcatatcaattctcacatatacc
cctcaaaaatctgtcactttgaagtgccatctcatgctcgctatcacaaatgtgctgata
tgtacgacctgtttggccagccaggcaaaagtcgctgaggacttcttaaactttctgttc
agaaacattcaggacacaaatgataattcagggggcttgtgtgtccacgctttacgagcc
acggcttgcgagtgtcttcgagaaatggaaaactgccagcctggtctactttcacaaaag
ttggaggctctttactaccttaagaaccaagaaacaacggttcttcatcagtcttactct
ttgctgtattctctagggctcaagaatgcaatacatctgctggcaaaacaaaaaaatgtg
gacaatgcaaagctcaggggtgtccttagtggaaatgaaggctttgtatggaaggccatt
gacttgcctttgtctgtgttgccttttggcatgatctcacaagttccacagctgccaaca
acattggattgcaaggatctgcggtctattatgtccttgctcctggaagaatcctatttg
atgactcctgcctcacaggtagcattgcttcgtggacttgtagaaattgttgcgatggta
ccagctattactccggcagtattcaagtctcagttgttaagactttttggaacaacagag
gtagagctgatgcatgccacactcataatgaaagggacatttacagatagcctcttcacc
gctgaggatgagaattttctgctcaagcgccttactgggatggcacaacatccgcttctg
aaaactccagagaaactgttttacatggactgcatccttcactttcctgaaaacagaccg
atctcaagcagtggagaggagtccctacctgtcctggtcacgcctcaacttacattatcc
ttgtttcctactgtgtttgatgacagtaccaccatgctctgtagactgaatcttctctgt
ctggtacttctggaggcagatgaggatgaggaaagcaaaggcttaagctaccttttcgat
cacctgatggccttacttaaaatagtcaacaaccaaggaagcagggacatgattactatg
tttttcagagcaaccttcattttcctcatgcacttcaaccacataaagaaattctcaaaa
aaacttgtcagcaagctttgtgagctgtattccaaaaactgtcatctcgctccgaatatg
atcaacctcgctgacaaagtccaagaatgctttgaagattcgatatggtcagtacggttg
ttaacagctcttcaaaagtgcattgtggaaatgccacctttgcaactgacccttcagaat
ttgagttggcaccttaaaatcttggctcgagtggcactcgagagtcagattgcgcagaga
aacacaatccactttcttctcaacatcctcatcaattccaatctttgtgaaagaaggagc
tggcaggttggcactgcaattctgactgtttgtcgcaacttgctccagcatccaacctta
aacgaggtgtttatcgaactggcagaccttttgcagcatatgttaaaacactatgaagac
tcagatattcaagaccatgctcggttttactacacccttctgaccaacttgtcttgggaa
aaactcgccggagttcttgccaaagctccagaaggagggcagatgaaagtccgatcgatg
tcggccattgtggctgaaagtgatgggcttaccagttgcttgactgttcagaagcctgaa
ggttgtgttctacagcttaccaaaattgacaagactgactctcagggtgtaggtccaatt
acagagagtcaggaagctctaggacagagggacttatttgaggtctatcaagatcagttt
aagagcccaggctttgcatctgaggtcacgttatgttataacctgactcatgccagtgta
aaagatgttgggtttgacagaatttacacaatatgcctgcactttgacttgaacacctcc
cactatgcagaagtcaaggacattcatgtgccctgcctcttcagagacagaaagccacct
caagttaacctgaccttaaggccacatcatccttacccaacaagtctacgagtaagtgct
ctttttacgactgaagatggcctctcatggaacactcagctgcctgatgtagaggtttca
tttccagaaatatttctccccatgcctttgccacaagggacatcaccagagtccaaagag
gaagtgttcgacaagatttggaaaaacatttcatcaggggaacctagcagttctgaaact
agcctgtattgttttaagactgacagggacacactagctaatctgatagaagagtatttt
aagggctaccttgtagcacagactaaagaccaagtttgcaaagtcctgttttatcttcca
ccttttttccatgttttgttgatgatcagtgaggcagaggatgctgttcaactcagaatt
gcaacagaaaactcagagctgctgcctcacatcaactcttatcttcagagtataactgga
aacagtagcttgacaaatgctagaaaatag
DBGET
integrated database retrieval system