Trichomycterus rosablanca: 134309165
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Entry
134309165 CDS
T09921
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134309165 (snx13)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134309165 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
Nexin_C
PX
PXA
RGS
HipN
NCH1
DUF6395
Motif
Other DBs
NCBI-GeneID:
134309165
NCBI-ProteinID:
XP_062846870
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Position
2:complement(36550364..36571254)
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AA seq
762 aa
AA seq
DB search
MERKICRDVVCTSNKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILSRGVLLPLI
NQLSDPDYINQFVIWMIRDSSCNYEAFLNILKLTDKPDELEAVKDKVLEELQYLRSLDTA
GDDINMIKNQINSLLFVKKVCDTRIQRLQSGKEVDAVKLAASFGKLCIIPLDHILVHNIA
LQFFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLEVMQNWQKDGRKQSNQTKGLLKAATL
GVYEQYLSEKASPRVQVDQASLDRLTERLNKEDPTPEMFDDIQRKVYDMMLKDERFYPSF
RQHPLYVRMLAELDMLKEPSYRGSDDGDAESFNGSPTGSINLSLDDLTNATTDESVIIHA
FISDTVLDASLNLIPVLGVCNDHGKTYALYAITVVRKNPDGSEDTWKTYRRYSDFHDFHM
RITEQFENINTILKLPGKKTFNNMDRDFLERRKKDLNAYLQLLLNPEMVKACPTLIPYVH
DFLENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSIPDSLAEGMTKVSDNMGRMSE
RLGQDLKQSIFKVPPLIPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERN
QWLRRNIKNLLQQLIKATYGDTINRKIVDHVDFMTSPEQVADYVKRFRDSYWPNGILAET
PPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGAETTRKGILRVFEMFQHQQLNRRLVYV
FLEGFLETMFPQYKFPELFIKLHSRSPRIQAYTQKVRSLQKR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaagatctgtagagatgtggtgtgtacctccaacaaggatgaggaaggcttt
ctacgggatctgtgcgaggtgctgctgtatttgttactacctccaggagacttccacaac
aagaacatgagatactttctcagggaaattttgtcaagaggagtattgctccccctgatt
aaccaactaagtgatccagattatatcaatcagtttgtcatctggatgattcgggattcc
agctgcaactatgaagcctttctgaatatcttaaagctgactgacaagccagatgagcta
gaggctgtcaaagataaagttttagaggagctccagtacctacgctcactagatactgca
ggagatgatatcaacatgataaaaaatcaaatcaacagcttattatttgtgaaaaaagtc
tgtgatacaagaatacaaagactacagtcagggaaggaagttgatgctgtgaaacttgca
gcaagttttggaaagttgtgtataatcccattggatcacatcttagtgcacaatatagca
ctgcagttctttatggactacatgcagcagatggggggtcaggcagatctcttcttctgg
ctgactgtggaaggttaccgggtgacggcgcagcagcagctggaggtcatgcagaactgg
cagaaagatggcaggaaacagagcaaccagacgaagggcctgttaaaagctgctacactg
ggtgtctatgaacaatacctctctgagaaggcctctcctagagtgcaggtcgatcaggca
tcactagatagactgactgaaagacttaacaaagaggatccaaccccagagatgtttgat
gacatccagagaaaggtgtatgatatgatgttgaaagatgagcgcttctacccctctttt
aggcagcaccctctttacgtgcgcatgctggccgagctggacatgctgaaggaacccagt
tacagggggtctgatgatggagatgcggagtcttttaatggatctccaaccggaagtatt
aatttgtctttggatgacctcacaaacgccactacagatgagtctgtgataatacatgct
ttcatctctgatactgtacttgatgcttctttaaacctaattcccgtgctaggagtgtgt
aatgaccacgggaagacctacgctctctacgcaatcaccgttgtccgcaagaacccagat
ggtagtgaggacacctggaagacctaccgtcgctacagcgacttccacgacttccacatg
cgcatcactgagcagtttgagaacatcaacactatattaaaacttcctggaaagaaaaca
ttcaacaatatggacagggacttcctggagagaaggaagaaggacttgaatgcgtatttg
cagctgctgttaaatccagagatggtgaaagcttgtcccactttaataccttacgtccat
gacttcctggagaacaaggcgtacagcaagggcaagggcgattttgcacggaagatggac
acatttgttaaccctcttcgtagctccatgcggaatgtttcaaatgctgtgaaatcgatt
cctgacagtctggctgaaggaatgacaaaagtgtcagacaatatggggcgaatgtctgag
agactgggccaggacctcaaacaatccatatttaaggttccgcccttaattccaaagtcc
gacattgaccctgaacactgccgagtctctgcccagttggatgacaatgtggatgataac
attcctctgcgagtgatgctgctgctgatggatgaggtgtttgacttgaaggaacgaaac
cagtggctccggaggaacatcaagaaccttctacagcagctcatcaaagccacatatgga
gacactatcaacaggaaaattgtggatcatgtagacttcatgacctcacctgaacaagta
gcagactatgtcaagagattcagagattcctactggcctaatggaatcctggcagagacg
ccaccacgcagagacaagaacattcgcatgagaacacgagtagcagctaagactaacctc
ctaggcatcatgccagacgagctgaagcacattatcggcgcagaaaccacacgtaagggc
atcctccgggtttttgaaatgttccagcaccagcagctaaaccgccgcctcgtctacgtc
ttcctggagggctttctggagaccatgtttcctcagtacaagttcccagagctcttcatc
aagttgcattcacgctcgccgcgcatccaggcttacacacagaaagtgcgcagcttacag
aaaaggtga
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